CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037514.1-P	Field mustard	mitochondrion	98.03	98.89
CDY54516	Canola	mitochondrion	95.61	96.25
CDY45921	Canola	mitochondrion	85.53	87.25
CDY35761	Canola	mitochondrion	85.31	87.02
AT5G48030.1	Thale cress	mitochondrion	84.21	84.21
VIT_13s0064g01360.t01	Wine grape	mitochondrion	61.4	62.08
PGSC0003DMT400064990	Potato	mitochondrion	59.65	61.4
Solyc01g086740.2.1	Tomato	mitochondrion	59.65	61.4
KRH27511	Soybean	mitochondrion	58.33	60.05
KRH36456	Soybean	mitochondrion	57.89	59.59
TraesCS7D01G045900.2	Wheat	mitochondrion	51.97	59.4
GSMUA_Achr4P11580_001	Banana	mitochondrion	58.11	58.63
Zm00001d035975_P001	Maize	mitochondrion	55.04	58.51
EER89093	Sorghum	mitochondrion, plastid	55.7	58.39
KRH13903	Soybean	mitochondrion	56.58	58.11
Zm00001d035974_P001	Maize	mitochondrion	54.61	58.04
KRH43470	Soybean	mitochondrion	56.36	57.88
GSMUA_Achr3P00410_001	Banana	mitochondrion	56.8	57.56
TraesCS7A01G051000.1	Wheat	mitochondrion	55.26	57.4
Os06t0116800-01	Rice	mitochondrion	53.51	55.2
HORVU7Hr1G009230.8	Barley	plastid	53.51	54.83
EES15725	Sorghum	mitochondrion, plastid	48.46	52.74
Os12t0168400-01	Rice	plastid	47.59	51.79
Zm00001d023537_P002	Maize	mitochondrion	47.59	51.06
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	46.27	50.12
TraesCS5A01G117600.1	Wheat	plastid	46.05	49.88
HORVU5Hr1G036400.3	Barley	plastid	46.49	49.65
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	45.83	49.64
GSMUA_Achr4P12400_001	Banana	mitochondrion	49.78	48.5
CDX90134	Canola	mitochondrion	31.8	33.72
CDY25588	Canola	plastid	30.92	31.06
CDX89453	Canola	plastid	30.7	30.97
CDY37986	Canola	cytosol	15.57	30.08
CDY20944	Canola	cytosol	19.3	28.85
CDY35719	Canola	mitochondrion	31.36	28.77
CDX97443	Canola	cytosol	18.86	28.57
CDY63891	Canola	cytosol	30.26	28.4
CDX92876	Canola	cytoskeleton, cytosol, nucleus	19.52	27.99
CDY27963	Canola	cytosol	20.18	27.96
CDY64940	Canola	nucleus	19.96	27.74
CDY20637	Canola	cytosol	19.3	27.5
CDX80523	Canola	cytosol	19.3	27.41
CDX88188	Canola	cytosol	19.3	27.41
CDX69371	Canola	mitochondrion	30.04	27.35
CDY58657	Canola	cytosol	19.52	27.3
CDY07893	Canola	cytosol	19.3	27.24
CDY11430	Canola	golgi	20.61	27.17
CDX76646	Canola	golgi	20.61	27.17
CDY29908	Canola	cytoskeleton, cytosol, nucleus	19.08	27.1
CDY63310	Canola	endoplasmic reticulum	20.61	27.09
CDY58774	Canola	plastid	29.61	27.0
CDY68815	Canola	cytoskeleton, cytosol, nucleus	19.74	26.95
CDX67894	Canola	endoplasmic reticulum, golgi	19.3	26.91
CDY35188	Canola	cytosol	19.08	26.85
CDY22173	Canola	cytosol	19.74	26.79
CDX87288	Canola	plastid	29.39	26.75
CDY59898	Canola	endoplasmic reticulum, golgi	20.18	26.51
CDY65077	Canola	cytosol	19.52	26.49
CDY13869	Canola	cytosol	19.52	26.33
CDX89142	Canola	endoplasmic reticulum	19.96	26.22
CDX88812	Canola	nucleus	23.25	25.98
CDX83026	Canola	cytosol	18.64	25.91
CDY05498	Canola	cytosol	18.86	25.83
CDY54902	Canola	cytosol	18.86	25.83
CDX70980	Canola	nucleus	23.03	25.8
CDY38388	Canola	cytosol	19.3	25.73
CDY45143	Canola	cytoskeleton, cytosol, nucleus	18.64	25.68
CDY65546	Canola	nucleus	23.68	25.65
CDX92385	Canola	nucleus	23.68	25.59
CDY36915	Canola	cytosol	18.64	25.45
CDX92386	Canola	nucleus	23.46	25.36
CDY09117	Canola	nucleus	23.25	25.06
CDY30900	Canola	cytoskeleton, cytosol, nucleus	18.2	24.63
CDX68447	Canola	cytosol	18.42	24.49
CDX92166	Canola	plastid	26.75	24.16
CDX95817	Canola	plastid	26.32	23.86
CDY21803	Canola	nucleus	16.89	22.78
CDY24146	Canola	cytosol	18.64	22.55
CDY16617	Canola	nucleus	7.89	17.31
CDY66166	Canola	plastid	11.18	14.66
CDY14974	Canola	nucleus	10.96	14.45
CDY20589	Canola	nucleus	10.96	12.72
CDY20977	Canola	nucleus	11.18	12.66
CDX97927	Canola	nucleus	11.62	12.24
CDY67277	Canola	cytosol, nucleus, plastid	11.62	12.18

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	GO:A0A078DAQ6	EnsemblPlants:CDX86330
ProteinID:CDX86330	ProteinID:CDX86330.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0051082	EnsemblPlantsGene:GSBRNA2T00144452001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0004EF4A2A
SEG:seg	:	:	:	:	:

Description

BnaA06g30470D

Coordinates

chrLK031845:+:963621..967181

Molecular Weight (calculated)

49790.0 Da

IEP (calculated)

9.772

GRAVY (calculated)

-0.584

Length

456 amino acids

Sequence
(BLAST)

001: MLPNAKVIRL LARRCLSSSR AQDFAYQKLR GVAVGSYRRL NTGSGNPAKV LGDHASKSGK FAIRKWRWIS FGGFNSNFGS TRSIHGTGSS SMSSKDYYEL
101: LGVNKNATDG EIKKAYYGLA KKLHPDMNKD DPEAEKKFQE VSKAYEILKD KEKRDLYDQV GHEAFEQNAS GGFPNDGGGG FGQGFDPFDN PFDIFGQIFN
201: RNKQAFGGQD VKVLLELSFM EAVQGCSKTV TFQTDMACNT CGGQGVPPGT KRERCKACDG SGMTTMRRGI LSIQRTCQQC GGAGQTFSSI CKSCRGARVV
301: PGQKSVKVNI DPGVDNSDTI KVGRAGGADP EGDQPGDLYV IFKVREDPVF RREGSDIHVN SVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGQKVVLR
401: NKGIRARKST RFGDQYVHFN VSIPANITQR QRELLEEFVK EEQGEYEKRT ASGSSQ

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.