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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031127.1-P Field mustard cytosol 98.82 98.82
CDY65077 Canola cytosol 97.63 98.21
AT2G20560.1 Thale cress cytosol 93.49 93.77
CDY35188 Canola cytosol 81.95 85.49
CDY29908 Canola cytoskeleton, cytosol, nucleus 79.88 84.11
CDX92876 Canola cytoskeleton, cytosol, nucleus 78.4 83.33
CDX97443 Canola cytosol 73.37 82.39
CDY38388 Canola cytosol 82.25 81.29
KRH25647 Soybean nucleus 81.36 78.8
KRH55895 Soybean endoplasmic reticulum, nucleus 81.95 78.69
KRH10937 Soybean cytosol 76.33 76.11
Solyc02g077670.2.1 Tomato cytosol 77.22 76.09
PGSC0003DMT400081223 Potato cytosol 76.33 75.66
KRH21363 Soybean cytosol 67.16 73.7
KRH12423 Soybean cytoskeleton, cytosol, nucleus 56.51 72.62
CDY64940 Canola nucleus 67.16 69.21
CDY58657 Canola cytosol 65.68 68.1
CDY07893 Canola cytosol 64.5 67.49
CDY27963 Canola cytosol 65.68 67.48
CDY68815 Canola cytoskeleton, cytosol, nucleus 66.57 67.37
CDY22173 Canola cytosol 66.27 66.67
KRH10940 Soybean cytosol 62.43 62.8
KRH21362 Soybean cytosol 62.43 62.06
CDY20944 Canola cytosol 55.92 61.97
CDY37986 Canola cytosol 41.42 59.32
CDY30900 Canola cytoskeleton, cytosol, nucleus 58.88 59.05
CDY20637 Canola cytosol 55.62 58.75
CDY45143 Canola cytoskeleton, cytosol, nucleus 57.4 58.61
CDX88188 Canola cytosol 55.62 58.57
CDY05498 Canola cytosol 57.69 58.56
CDY54902 Canola cytosol 57.69 58.56
CDX80523 Canola cytosol 55.33 58.26
CDX83026 Canola cytosol 53.55 55.18
CDY36915 Canola cytosol 54.14 54.79
CDX68447 Canola cytosol 55.33 54.52
KRH40259 Soybean cytosol 24.85 52.83
CDY21803 Canola nucleus 52.07 52.07
CDY24146 Canola cytosol 53.85 48.28
CDY59898 Canola endoplasmic reticulum, golgi 34.32 33.43
CDX67894 Canola endoplasmic reticulum, golgi 32.25 33.33
CDX89142 Canola endoplasmic reticulum 34.02 33.14
CDY63310 Canola endoplasmic reticulum 34.02 33.14
CDX76646 Canola golgi 33.73 32.95
CDY11430 Canola golgi 33.73 32.95
CDY65546 Canola nucleus 36.69 29.45
CDX92385 Canola nucleus 36.39 29.15
CDX92386 Canola nucleus 36.39 29.15
CDY66166 Canola plastid 29.88 29.02
CDY14974 Canola nucleus 29.59 28.9
CDY09117 Canola nucleus 35.8 28.61
CDX88812 Canola nucleus 34.02 28.19
CDX70980 Canola nucleus 33.43 27.76
CDY20589 Canola nucleus 27.51 23.66
CDX89453 Canola plastid 31.36 23.45
CDY25588 Canola plastid 31.36 23.35
CDY16617 Canola nucleus 14.2 23.08
CDY20977 Canola nucleus 27.22 22.83
CDX97927 Canola nucleus 28.4 22.17
CDY67277 Canola cytosol, nucleus, plastid 28.11 21.84
CDY63891 Canola cytosol 29.29 20.37
CDY35761 Canola mitochondrion 26.92 20.36
CDY45921 Canola mitochondrion 26.63 20.13
CDY58774 Canola plastid 29.59 20.0
CDX87288 Canola plastid 29.59 19.96
CDX69371 Canola mitochondrion 29.29 19.76
CDY54516 Canola mitochondrion 26.33 19.65
CDX86330 Canola mitochondrion 26.33 19.52
CDX95817 Canola plastid 27.81 18.69
CDX92166 Canola plastid 27.81 18.61
CDX90134 Canola mitochondrion 22.49 17.67
CDY35719 Canola mitochondrion 21.89 14.89
Protein Annotations
Gene3D:1.10.287.110MapMan:19.1.5.2Gene3D:2.60.260.20GO:A0A078FLS1UniProt:A0A078FLS1EnsemblPlants:CDY13869
ProteinID:CDY13869ProteinID:CDY13869.1InterPro:DnaJ_CInterPro:DnaJ_domainInterPro:DnaJ_domain_CSGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0006457GO:GO:0008150GO:GO:0009987GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00078317001InterPro:HSP40/DnaJ_pept-bdInterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sfPFAM:PF00226
PFAM:PF01556PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076PANTHER:PTHR24078PANTHER:PTHR24078:SF298
SMART:SM00271SUPFAM:SSF46565SUPFAM:SSF49493UniParc:UPI0003C6FA24SEG:seg:
Description
BnaA09g43710DBnaA09g43710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLS1]
Coordinates
chrLK032038:+:719904..721259
Molecular Weight (calculated)
37068.1 Da
IEP (calculated)
9.297
GRAVY (calculated)
-0.599
Length
338 amino acids
Sequence
(BLAST)
001: MGVDYYNVLQ VDRNASEDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFA TGDGPTSFRF
101: NPRSADDIFA EFFGFSRPFG GGGGGGTRFS SSMFGDNIFA SFGEAGGGGG AMHHGGGARK AAPIENRLPC SLEDLYKGTT KKMKISREIA DVSGKTMPVE
201: EILTIDVKPG WKKGTRITFP EKGNEQPGVT PADLVFIIDE KPHPVFTREG NDLIVTQRIS LAEALTGYTV NLTTLDGRRL TIPVTNVIHP EYEEVVPKEG
301: MPLQKDQTKR GNLRIKFNIK FPTRLTSEQK AGVKKLLG
Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)
001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG
Arabidopsis Description
At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.