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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, nucleus, cytoskeleton

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytoskeleton, cytosol, nucleus
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024199.1-P Field mustard cytoskeleton, cytosol, nucleus 99.69 99.69
CDX92876 Canola cytoskeleton, cytosol, nucleus 96.88 97.8
CDY35188 Canola cytosol 90.03 89.2
CDY38388 Canola cytosol 89.41 83.92
CDX97443 Canola cytosol 77.57 82.72
CDY65077 Canola cytosol 84.11 80.36
CDY13869 Canola cytosol 84.11 79.88
KRH25647 Soybean nucleus 79.44 73.07
KRH55895 Soybean endoplasmic reticulum, nucleus 79.13 72.16
KRH10937 Soybean cytosol 74.45 70.5
Solyc02g077670.2.1 Tomato cytosol 73.83 69.1
PGSC0003DMT400081223 Potato cytosol 73.21 68.92
CDY07893 Canola cytosol 68.85 68.42
CDY58657 Canola cytosol 69.16 68.1
CDY64940 Canola nucleus 69.16 67.68
KRH12423 Soybean cytoskeleton, cytosol, nucleus 55.45 67.68
CDY68815 Canola cytoskeleton, cytosol, nucleus 70.09 67.37
CDY22173 Canola cytosol 70.41 67.26
KRH21363 Soybean cytosol 64.49 67.21
CDY27963 Canola cytosol 67.6 65.96
CDY20944 Canola cytosol 57.63 60.66
CDY37986 Canola cytosol 44.55 60.59
KRH10940 Soybean cytosol 62.93 60.12
KRH21362 Soybean cytosol 62.62 59.12
CDY20637 Canola cytosol 58.88 59.06
CDY54902 Canola cytosol 59.81 57.66
CDY05498 Canola cytosol 59.81 57.66
CDX88188 Canola cytosol 57.63 57.63
CDY30900 Canola cytoskeleton, cytosol, nucleus 60.44 57.57
CDX80523 Canola cytosol 57.32 57.32
CDY45143 Canola cytoskeleton, cytosol, nucleus 58.57 56.8
CDY36915 Canola cytosol 58.26 55.99
CDX83026 Canola cytosol 56.39 55.18
CDX68447 Canola cytosol 57.94 54.23
KRH40259 Soybean cytosol 26.48 53.46
CDY21803 Canola nucleus 54.83 52.07
CDY24146 Canola cytosol 57.32 48.81
CDX67894 Canola endoplasmic reticulum, golgi 33.64 33.03
CDY59898 Canola endoplasmic reticulum, golgi 35.51 32.85
CDY63310 Canola endoplasmic reticulum 35.2 32.56
CDX89142 Canola endoplasmic reticulum 35.2 32.56
CDX76646 Canola golgi 34.89 32.37
CDY11430 Canola golgi 34.89 32.37
CDY65546 Canola nucleus 38.01 28.98
CDY66166 Canola plastid 31.15 28.74
CDX92386 Canola nucleus 37.69 28.67
CDX92385 Canola nucleus 37.69 28.67
CDX70980 Canola nucleus 36.14 28.5
CDX88812 Canola nucleus 36.14 28.43
CDY14974 Canola nucleus 30.53 28.32
CDY09117 Canola nucleus 37.07 28.13
CDY16617 Canola nucleus 15.58 24.04
CDY20589 Canola nucleus 29.28 23.92
CDY20977 Canola nucleus 28.97 23.08
CDX97927 Canola nucleus 30.84 22.86
CDY67277 Canola cytosol, nucleus, plastid 30.53 22.53
CDX89453 Canola plastid 30.53 21.68
CDY25588 Canola plastid 30.53 21.59
CDY63891 Canola cytosol 29.91 19.75
CDY58774 Canola plastid 30.53 19.6
CDX87288 Canola plastid 30.53 19.56
CDY45921 Canola mitochondrion 26.79 19.24
CDY54516 Canola mitochondrion 27.1 19.21
CDX69371 Canola mitochondrion 29.91 19.16
CDX86330 Canola mitochondrion 27.1 19.08
CDY35761 Canola mitochondrion 26.48 19.02
CDX95817 Canola plastid 28.35 18.09
CDX92166 Canola plastid 28.35 18.02
CDX90134 Canola mitochondrion 22.43 16.74
CDY35719 Canola mitochondrion 21.18 13.68
Protein Annotations
Gene3D:1.10.287.110MapMan:19.1.5.2Gene3D:2.60.260.20GO:A0A078GZ82UniProt:A0A078GZ82EnsemblPlants:CDY29908
ProteinID:CDY29908ProteinID:CDY29908.1InterPro:DnaJ_CInterPro:DnaJ_domainInterPro:DnaJ_domain_CSGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0006457GO:GO:0008150GO:GO:0009987GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00044369001InterPro:HSP40/DnaJ_pept-bdInterPro:IPR001623InterPro:IPR036869InterPro:J_dom_sfPFAM:PF00226
PFAM:PF01556PRINTS:PR00625ScanProsite:PS00636PFscan:PS50076PANTHER:PTHR24078PANTHER:PTHR24078:SF298
SMART:SM00271SUPFAM:SSF46565SUPFAM:SSF49493UniParc:UPI0004EF0835SEG:seg:
Description
BnaA03g49290DBnaA03g49290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZ82]
Coordinates
chrLK032245:+:485733..487402
Molecular Weight (calculated)
35453.2 Da
IEP (calculated)
9.564
GRAVY (calculated)
-0.642
Length
321 amino acids
Sequence
(BLAST)
001: MGVDYYKLLQ VDRSATDDDL KKAYRKLAMK WHPDKNPTNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAASGASYF STGFNPRSAD
101: DIFAEFFGFS TPFGGGGGGG AGGSMHHHHH HHPHHHHQAA ARKVAPIENK LPCSLEDLYK GTTKKMKISR EILDASGKAT QTEEILTIGV KPGWKKGTKI
201: TFPEKGNEHP GVIPADLVFI IDEKPHPVFT RDGNDLIVTQ KISLAEALTG YTVNLTTLDG RTLTIPVTNV IHPEYEEVVP KEGMPLQKDQ TKKGNLRIKF
301: SIKFPARLTS EQKSGFKKLL G
Best Arabidopsis Sequence Match ( AT4G28480.1 )
(BLAST)
001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytosol,nucleus,cytoskeleton]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.