Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra019519.1-P | Field mustard | cytosol | 94.08 | 95.78 |
| CDY36915 | Canola | cytosol | 84.02 | 85.03 |
| CDX68447 | Canola | cytosol | 86.09 | 84.84 |
| CDX83026 | Canola | cytosol | 81.07 | 83.54 |
| AT3G47940.1 | Thale cress | cytosol | 79.88 | 77.14 |
| KRH63415 | Soybean | cytosol | 33.43 | 76.87 |
| CDY24146 | Canola | cytosol | 82.54 | 74.01 |
| KRH54495 | Soybean | nucleus | 68.34 | 65.81 |
| PGSC0003DMT400083040 | Potato | cytosol | 63.91 | 64.09 |
| VIT_17s0000g05530.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 65.98 | 63.9 |
| Solyc06g071110.2.1 | Tomato | nucleus | 63.02 | 63.2 |
| KRH63417 | Soybean | nucleus | 34.91 | 58.13 |
| CDY20944 | Canola | cytosol | 51.48 | 57.05 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 55.33 | 56.5 |
| CDY37986 | Canola | cytosol | 39.05 | 55.93 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 55.62 | 55.79 |
| CDY07893 | Canola | cytosol | 53.25 | 55.73 |
| CDY64940 | Canola | nucleus | 53.25 | 54.88 |
| CDY29908 | Canola | cytoskeleton, cytosol, nucleus | 52.07 | 54.83 |
| CDX97443 | Canola | cytosol | 48.82 | 54.82 |
| CDX92876 | Canola | cytoskeleton, cytosol, nucleus | 51.48 | 54.72 |
| CDY20637 | Canola | cytosol | 51.78 | 54.69 |
| CDY35188 | Canola | cytosol | 52.37 | 54.63 |
| CDY58657 | Canola | cytosol | 52.66 | 54.6 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 53.85 | 54.49 |
| CDY27963 | Canola | cytosol | 52.66 | 54.1 |
| CDY22173 | Canola | cytosol | 52.96 | 53.27 |
| CDY38388 | Canola | cytosol | 52.96 | 52.34 |
| CDY13869 | Canola | cytosol | 52.07 | 52.07 |
| CDY65077 | Canola | cytosol | 51.48 | 51.79 |
| CDX88188 | Canola | cytosol | 48.82 | 51.4 |
| CDX80523 | Canola | cytosol | 48.52 | 51.09 |
| CDY54902 | Canola | cytosol | 48.22 | 48.95 |
| CDY05498 | Canola | cytosol | 48.22 | 48.95 |
| CDY59898 | Canola | endoplasmic reticulum, golgi | 29.88 | 29.11 |
| CDX67894 | Canola | endoplasmic reticulum, golgi | 28.11 | 29.05 |
| CDX89142 | Canola | endoplasmic reticulum | 29.59 | 28.82 |
| CDY63310 | Canola | endoplasmic reticulum | 29.59 | 28.82 |
| CDY11430 | Canola | golgi | 28.99 | 28.32 |
| CDX76646 | Canola | golgi | 28.99 | 28.32 |
| CDX70980 | Canola | nucleus | 33.43 | 27.76 |
| CDX88812 | Canola | nucleus | 33.14 | 27.45 |
| CDY65546 | Canola | nucleus | 33.14 | 26.6 |
| CDX92386 | Canola | nucleus | 32.84 | 26.3 |
| CDX92385 | Canola | nucleus | 32.84 | 26.3 |
| CDY09117 | Canola | nucleus | 32.54 | 26.0 |
| CDY20977 | Canola | nucleus | 30.47 | 25.56 |
| CDY20589 | Canola | nucleus | 29.29 | 25.19 |
| CDY66166 | Canola | plastid | 24.85 | 24.14 |
| CDY14974 | Canola | nucleus | 24.56 | 23.99 |
| CDX97927 | Canola | nucleus | 30.47 | 23.79 |
| CDY67277 | Canola | cytosol, nucleus, plastid | 30.47 | 23.68 |
| CDY16617 | Canola | nucleus | 14.5 | 23.56 |
| CDY58774 | Canola | plastid | 26.63 | 18.0 |
| CDX89453 | Canola | plastid | 23.67 | 17.7 |
| CDY35761 | Canola | mitochondrion | 23.37 | 17.67 |
| CDY25588 | Canola | plastid | 23.67 | 17.62 |
| CDX87288 | Canola | plastid | 26.04 | 17.56 |
| CDY45921 | Canola | mitochondrion | 23.08 | 17.45 |
| CDY54516 | Canola | mitochondrion | 23.08 | 17.22 |
| CDX86330 | Canola | mitochondrion | 22.78 | 16.89 |
| CDX90134 | Canola | mitochondrion | 20.71 | 16.28 |
| CDY63891 | Canola | cytosol | 23.08 | 16.05 |
| CDX69371 | Canola | mitochondrion | 23.08 | 15.57 |
| CDX95817 | Canola | plastid | 22.49 | 15.11 |
| CDX92166 | Canola | plastid | 22.49 | 15.05 |
| CDY35719 | Canola | mitochondrion | 19.82 | 13.48 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | GO:A0A078GAR4 | UniProt:A0A078GAR4 | EnsemblPlants:CDY21803 |
| ProteinID:CDY21803 | ProteinID:CDY21803.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 |
| EnsemblPlantsGene:GSBRNA2T00016349001 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF524 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0004EE4868 | SEG:seg | : |
Description
BnaA06g20720DBnaA06g20720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GAR4]
Coordinates
chrLK032124:-:399030..401989
Molecular Weight (calculated)
38182.7 Da
IEP (calculated)
9.458
GRAVY (calculated)
-0.714
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSCLCIHCW RERWVNHNAR EDDLKKAYKR LAMIWHPDKN PSARRDEAES KFKRISEAYD VLSDPQKRQI YDLYGEEGLK SGKIPSSSDA SSSSSWRTPQ
101: FHHQHRPHPP NAASFRFNPR DADDIYAEIF GSEGGGGGHR TFRNGHFNTG RSSELRKAPA VENPLPCSLE DLCKGAKKKM RLSRNVYDAS GKMRVVEEIL
201: PIEIKPGWKK GTKLTFPEKG NEEPGIIPAD IIFVVEEKPH PVFKRDGNDL VFSQEITLLE ALTGKSIDLI TLDGRTLMIP LTDIINPDHE IVVPNEGMPI
301: SKEPGRKGNL RLKLNVRYPS KLTGEQKSEL KRVLGGVL
101: FHHQHRPHPP NAASFRFNPR DADDIYAEIF GSEGGGGGHR TFRNGHFNTG RSSELRKAPA VENPLPCSLE DLCKGAKKKM RLSRNVYDAS GKMRVVEEIL
201: PIEIKPGWKK GTKLTFPEKG NEEPGIIPAD IIFVVEEKPH PVFKRDGNDL VFSQEITLLE ALTGKSIDLI TLDGRTLMIP LTDIINPDHE IVVPNEGMPI
301: SKEPGRKGNL RLKLNVRYPS KLTGEQKSEL KRVLGGVL
001: MGVDYYNILK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSSEASS SSSSSSSRYP
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SU57]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.