CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	98.79	96.18
CDY30900	Canola	cytoskeleton, cytosol, nucleus	95.77	94.07
AT1G59725.1	Thale cress	cytoskeleton, cytosol, nucleus	84.89	84.89
CDY20944	Canola	cytosol	71.6	77.7
CDY20637	Canola	cytosol	72.51	75.0
CDY37986	Canola	cytosol	50.76	71.19
Solyc05g006820.2.1	Tomato	plastid	60.73	64.63
PGSC0003DMT400045398	Potato	mitochondrion	60.42	64.31
PGSC0003DMT400007444	Potato	cytosol	60.12	64.19
Solyc04g005820.2.1	Tomato	cytosol, nucleus	60.42	62.5
KRH69388	Soybean	cytosol	51.66	61.96
KRH74747	Soybean	cytosol	51.06	61.01
VIT_01s0026g01450.t01	Wine grape	cytosol	49.55	60.07
CDX83026	Canola	cytosol	59.52	60.06
CDY07893	Canola	cytosol	57.7	59.13
CDY36915	Canola	cytosol	59.21	58.68
CDY29908	Canola	cytoskeleton, cytosol, nucleus	56.8	58.57
KRH45833	Soybean	cytosol	51.06	58.48
CDY35188	Canola	cytosol	57.1	58.33
CDX92876	Canola	cytoskeleton, cytosol, nucleus	55.89	58.18
CDY64940	Canola	nucleus	57.4	57.93
CDX68447	Canola	cytosol	59.82	57.73
CDX80523	Canola	cytosol	55.89	57.63
CDX88188	Canola	cytosol	55.89	57.63
CDY68815	Canola	cytoskeleton, cytosol, nucleus	58.01	57.48
KRG99186	Soybean	cytosol	50.15	57.44
CDY13869	Canola	cytosol	58.61	57.4
CDY58657	Canola	cytosol	56.5	57.36
CDX97443	Canola	cytosol	51.96	57.14
CDY65077	Canola	cytosol	58.01	57.14
CDY27963	Canola	cytosol	56.5	56.84
CDY38388	Canola	cytosol	58.31	56.43
CDY22173	Canola	cytosol	56.8	55.95
CDY21803	Canola	nucleus	56.5	55.33
CDY54902	Canola	cytosol	55.59	55.26
CDY05498	Canola	cytosol	55.59	55.26
KRH60063	Soybean	endoplasmic reticulum, golgi	31.12	52.02
CDY24146	Canola	cytosol	58.61	51.46
CDY59898	Canola	endoplasmic reticulum, golgi	33.23	31.7
CDX67894	Canola	endoplasmic reticulum, golgi	31.12	31.5
CDX89142	Canola	endoplasmic reticulum	32.93	31.41
CDY63310	Canola	endoplasmic reticulum	32.93	31.41
CDX76646	Canola	golgi	32.63	31.21
CDY11430	Canola	golgi	32.63	31.21
CDX88812	Canola	nucleus	34.14	27.7
CDY65546	Canola	nucleus	34.44	27.08
CDX70980	Canola	nucleus	33.23	27.03
CDY09117	Canola	nucleus	34.44	26.95
CDX92386	Canola	nucleus	34.14	26.78
CDX92385	Canola	nucleus	34.14	26.78
CDY66166	Canola	plastid	27.79	26.44
CDY14974	Canola	nucleus	27.19	26.01
CDY20589	Canola	nucleus	29.91	25.19
CDY20977	Canola	nucleus	30.51	25.06
CDY16617	Canola	nucleus	15.41	24.52
CDX97927	Canola	nucleus	30.51	23.33
CDY67277	Canola	cytosol, nucleus, plastid	30.21	22.99
CDX89453	Canola	plastid	27.19	19.91
CDY25588	Canola	plastid	27.19	19.82
CDY58774	Canola	plastid	29.91	19.8
CDX87288	Canola	plastid	29.61	19.56
CDY35761	Canola	mitochondrion	25.98	19.24
CDY45921	Canola	mitochondrion	25.68	19.02
CDY54516	Canola	mitochondrion	25.68	18.76
CDX86330	Canola	mitochondrion	25.68	18.64
CDX90134	Canola	mitochondrion	24.17	18.6
CDY63891	Canola	cytosol	25.98	17.7
CDX69371	Canola	mitochondrion	25.98	17.17
CDX95817	Canola	plastid	25.38	16.7
CDX92166	Canola	plastid	25.08	16.44
CDY35719	Canola	mitochondrion	23.57	15.69

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	GO:A0A078I7N2	UniProt:A0A078I7N2	EnsemblPlants:CDY45143
ProteinID:CDY45143	ProteinID:CDY45143.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
EnsemblPlantsGene:GSBRNA2T00081555001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF175
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0004EE1ADA	:	:

Description

BnaA09g14490DBnaA09g14490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7N2]

Coordinates

chrLK032616:+:94127..95768

Molecular Weight (calculated)

36691.4 Da

IEP (calculated)

8.869

GRAVY (calculated)

-0.676

Length

331 amino acids

Sequence
(BLAST)

001: MGVDYYNVLN VPPSASEDDL KKSYRRLAMK WHPDKNPSSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EDGLKSSDVP TPPTQTQRSY SSSNNDDAGF
101: RYYPRDAEDI FNEFFGASGD AVNGGGSRFR SAEAGSQTSR KTTASRKAPA IESKLACTLE ELYKGGRRKM RISRVVPDGL GKPKTVEEIL KIDITPGWKK
201: GTKITFPEKG NHEPGVTPAD LIFVIDEKPH SVYKRDGNDL IVDKKVSLLE ALTGITISLT TLDGRNLTIP VLDIVKPGQE IVIPNEGMPI SKEASKRGDL
301: RINFDICFPS RLTLEQKTDL KRVFGGAGVD N

Best Arabidopsis Sequence Match ( AT1G59725.1 )
(BLAST)

001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.