Factsheet for Bra027838.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45143	Canola	cytoskeleton, cytosol, nucleus	96.18	98.79
CDY30900	Canola	cytoskeleton, cytosol, nucleus	95.59	96.44
AT1G59725.1	Thale cress	cytoskeleton, cytosol, nucleus	83.82	86.1
Bra018443.1-P	Field mustard	nucleus	75.59	73.64
Solyc05g006820.2.1	Tomato	plastid	59.41	64.95
PGSC0003DMT400045398	Potato	mitochondrion	59.12	64.63
PGSC0003DMT400007444	Potato	cytosol	58.53	64.19
KRH69388	Soybean	cytosol	51.18	63.04
Solyc04g005820.2.1	Tomato	cytosol, nucleus	58.82	62.5
KRH74747	Soybean	cytosol	50.59	62.09
Bra033783.1-P	Field mustard	cytosol	58.53	61.23
VIT_01s0026g01450.t01	Wine grape	cytosol	48.82	60.81
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	57.06	60.44
KRH45833	Soybean	cytosol	50.29	59.17
Bra018099.1-P	Field mustard	cytosol	57.94	58.98
Bra031127.1-P	Field mustard	cytosol	58.53	58.88
Bra009848.1-P	Field mustard	cytosol	54.71	58.86
KRG99186	Soybean	cytosol	49.71	58.48
Bra019519.1-P	Field mustard	cytosol	56.76	58.13
Bra029729.1-P	Field mustard	nucleus	55.88	57.93
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	56.47	57.48
Bra020505.1-P	Field mustard	cytosol	55.0	56.16
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	53.53	55.83
Bra011031.1-P	Field mustard	cytosol	57.65	55.68
KRH60063	Soybean	endoplasmic reticulum, golgi	30.29	52.02
Bra010365.1-P	Field mustard	mitochondrion	45.29	39.69
Bra007687.1-P	Field mustard	golgi	32.94	32.37
Bra003501.1-P	Field mustard	nucleus	31.18	28.57
Bra006608.1-P	Field mustard	nucleus	33.82	28.19
Bra002385.1-P	Field mustard	nucleus	34.41	27.73
Bra020169.1-P	Field mustard	nucleus	34.41	27.66
Bra002386.1-P	Field mustard	nucleus	34.12	27.49
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	29.12	27.35
Bra036942.1-P	Field mustard	nucleus	27.06	26.36
Bra018413.1-P	Field mustard	nucleus	30.0	25.37
Bra019886.1-P	Field mustard	nucleus	29.71	23.33
Bra030245.1-P	Field mustard	plastid	27.35	20.58
Bra035201.1-P	Field mustard	plastid	29.71	20.16
Bra020721.1-P	Field mustard	mitochondrion	25.0	19.02
Bra037514.1-P	Field mustard	mitochondrion	25.0	18.81
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	25.29	18.78
Bra010892.1-P	Field mustard	mitochondrion	22.94	18.14
Bra011820.1-P	Field mustard	cytosol	26.18	16.82
Bra014400.1-P	Field mustard	golgi	32.65	16.62

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra027838	EnsemblPlants:Bra027838.1	EnsemblPlants:Bra027838.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4EGC4	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF524	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI00025427B0	SEG:seg	:	:	:

Description

AT1G59725 (E=6e-150) | DNAJ heat shock protein, putative

Coordinates

chrA09:-:9140679..9141900

Molecular Weight (calculated)

37512.3 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.681

Length

340 amino acids

Sequence
(BLAST)

001: MGVDYYNVLN VPPSASEDDL KKSYRRLAMK WHPDKNPSSK KEAEAKFKQI SEAYDVLSDP HKRQIYDQYG EDGLKSSDVP TPPTQTQRSY SSSNNDDAGF
101: RYYPRDAEDI FNEFFGASGD AFGGGGRRES VNGGGSRFRS AEAGSQTSRK ATASRKAPAI ESKLACTLEE LYKGGRRKMR ISRVVPDGLG KPKTVEEILK
201: IDITPGWKKG TKITFPEKGN HEPGVTPADL IFVIDEKPHS VYKRDGNDLI VDKKVSLLEA LTGITISLTT LDGRNLTIPV LDIVKPGQEI VIPNEGMPIS
301: KEASKRGDLR INFDICFPSR LTLEQKTDLK RVLGGAGVDN

Best Arabidopsis Sequence Match ( AT1G59725.1 )
(BLAST)

001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.