Factsheet for Bra010365.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	59.54	71.96
Bra011031.1-P	Field mustard	cytosol	63.4	69.89
Bra031127.1-P	Field mustard	cytosol	60.05	68.93
AT2G20550.2	Thale cress	cytosol	45.36	61.97
VIT_10s0003g00260.t01	Wine grape	cytosol	54.38	61.7
Solyc10g084300.1.1	Tomato	nucleus	37.63	55.3
Bra029729.1-P	Field mustard	nucleus	46.39	54.88
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	47.16	54.79
Solyc03g007650.1.1	Tomato	cytosol, mitochondrion, nucleus	37.11	52.75
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	43.81	52.15
Bra020505.1-P	Field mustard	cytosol	40.72	47.45
Bra009848.1-P	Field mustard	cytosol	37.89	46.52
Bra033783.1-P	Field mustard	cytosol	38.14	45.54
Bra018099.1-P	Field mustard	cytosol	39.18	45.51
Bra019519.1-P	Field mustard	cytosol	38.92	45.48
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	39.69	45.29
Bra018443.1-P	Field mustard	nucleus	39.95	44.41
Bra036942.1-P	Field mustard	nucleus	23.45	26.07
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	23.97	25.69
Bra007687.1-P	Field mustard	golgi	22.42	25.14
Bra002385.1-P	Field mustard	nucleus	27.32	25.12
Bra002386.1-P	Field mustard	nucleus	27.06	24.88
Bra020169.1-P	Field mustard	nucleus	26.55	24.35
Bra006608.1-P	Field mustard	nucleus	25.0	23.77
Bra003501.1-P	Field mustard	nucleus	22.16	23.18
Bra018413.1-P	Field mustard	nucleus	21.91	21.14
Bra019886.1-P	Field mustard	nucleus	22.94	20.55
Bra030245.1-P	Field mustard	plastid	21.39	18.36
Bra035201.1-P	Field mustard	plastid	21.13	16.37
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	18.3	15.5
Bra011820.1-P	Field mustard	cytosol	20.88	15.31
Bra020721.1-P	Field mustard	mitochondrion	17.27	14.99
Bra037514.1-P	Field mustard	mitochondrion	17.01	14.6
Bra010892.1-P	Field mustard	mitochondrion	15.21	13.72
Bra014400.1-P	Field mustard	golgi	23.2	13.47

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra010365	EnsemblPlants:Bra010365.1	EnsemblPlants:Bra010365.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	UniProt:M4D1L5	PFAM:PF01556	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520
SUPFAM:SSF49493	UniParc:UPI0002545495	SEG:seg	:	:	:

Description

AT4G28480 (E=8e-114) | DNAJ heat shock family protein

Coordinates

chrA08:-:14134418..14137027

Molecular Weight (calculated)

42596.4 Da

IEP (calculated)

10.329

GRAVY (calculated)

-0.679

Length

388 amino acids

Sequence
(BLAST)

001: MRSLCTTSRS DSSRATAQGR SRFHVWRHTF TPRSDLPERR AEVAPEAQSD HTRATGRSRS RFHHPETRER ARSDLSQRHS EVAPEAWSDL SERRAEVLSD
101: PQKRAVYDQY GEEGLKGNVP PPNAAGGASF FSSGDGPSPF KFNPRSADDL FAEIFGFSNP FGGGGGGAGA SGGQRFSSRM FGDDMYGSFG KGGGGGSMHH
201: NHHHTAARKV APIENKLPCS LEDLYKGTTK KMKISREIID VSGKVMQTEK ILTIGVKPGW KKGTKITFPE KGNEHPGVIP ADFVFIIDEK PHPVFARERN
301: DLIVTQKVSL ADALTGYTVN LTTLDGRTLS IPVTNVIHPE YGEVVPKEGM PLQKDQTKKG NLILKFNIKF PARLSAEQKA GFKKLLGR

Best Arabidopsis Sequence Match ( AT4G28480.1 )
(BLAST)

001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.