Factsheet for Bra019886.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97927	Canola	nucleus	99.08	99.08
CDY67277	Canola	cytosol, nucleus, plastid	99.08	98.62
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	84.99	84.02
Bra018413.1-P	Field mustard	nucleus	76.91	82.84
Os05t0427900-01	Rice	cytosol	16.63	45.57
GSMUA_Achr7P03030_001	Banana	cytosol	29.79	40.57
KRH64663	Soybean	plastid	32.1	39.27
GSMUA_Achr8P32540_001	Banana	mitochondrion	24.48	38.13
Os01t0875700-01	Rice	cytosol	27.94	37.0
Solyc06g060240.1.1	Tomato	cytosol	32.56	36.72
HORVU3Hr1G081940.1	Barley	cytosol	27.25	36.42
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	32.1	36.1
Zm00001d012242_P001	Maize	cytosol	26.1	35.76
TraesCS3A01G386400.1	Wheat	cytosol	26.33	35.62
EES01846	Sorghum	cytosol	27.02	35.56
TraesCS3D01G379400.1	Wheat	cytosol	26.56	35.38
TraesCS1B01G278300.1	Wheat	cytosol	26.56	35.17
TraesCS3B01G418500.1	Wheat	cytosol	26.33	35.08
TraesCS1D01G267500.1	Wheat	cytosol	26.79	35.05
TraesCS1A01G267600.1	Wheat	cytosol	25.87	34.25
Bra009848.1-P	Field mustard	cytosol	24.02	32.91
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.48	32.87
Bra018099.1-P	Field mustard	cytosol	25.17	32.63
Bra036942.1-P	Field mustard	nucleus	26.1	32.38
Bra029729.1-P	Field mustard	nucleus	24.48	32.32
Bra033783.1-P	Field mustard	cytosol	24.02	32.0
Zm00001d038250_P001	Maize	cytosol	24.71	31.94
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	23.79	31.6
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	24.25	31.44
Bra019519.1-P	Field mustard	cytosol	24.02	31.33
Bra020505.1-P	Field mustard	cytosol	24.02	31.23
EES19566	Sorghum	cytosol	24.48	31.18
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	22.63	30.53
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	23.33	29.71
Bra018443.1-P	Field mustard	nucleus	23.79	29.51
Zm00001d042653_P001	Maize	plastid	26.56	28.75
Bra031127.1-P	Field mustard	cytosol	21.94	28.11
Bra011031.1-P	Field mustard	cytosol	22.17	27.27
HORVU0Hr1G000620.4	Barley	plastid	22.86	25.06
Bra010365.1-P	Field mustard	mitochondrion	20.55	22.94
TraesCS6A01G421300.1	Wheat	cytosol	9.93	20.38
Bra007687.1-P	Field mustard	golgi	16.17	20.23
Bra003501.1-P	Field mustard	nucleus	16.4	19.14
HORVU7Hr1G073040.2	Barley	cytosol	9.7	18.1
Bra002385.1-P	Field mustard	nucleus	16.86	17.3
Bra002386.1-P	Field mustard	nucleus	16.86	17.3
Bra020169.1-P	Field mustard	nucleus	16.63	17.02
Bra006608.1-P	Field mustard	nucleus	15.94	16.91
Bra010892.1-P	Field mustard	mitochondrion	12.93	13.02
Bra030245.1-P	Field mustard	plastid	12.7	12.17
Bra020721.1-P	Field mustard	mitochondrion	12.24	11.86
Bra037514.1-P	Field mustard	mitochondrion	12.24	11.73
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	12.01	11.35
Bra035201.1-P	Field mustard	plastid	12.01	10.38
Bra014400.1-P	Field mustard	golgi	15.47	10.03
Bra011820.1-P	Field mustard	cytosol	12.01	9.83

Protein Annotations

EnsemblPlants:Bra019886.1	EnsemblPlants:Bra019886.1-P	EnsemblPlantsGene:Bra019886	Gene3D:2.60.260.20	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:DnaJ_C
InterPro:HSP40/DnaJ_pept-bd	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	PFAM:PF01556	SEG:seg	SUPFAM:SSF49493
UniParc:UPI000253EAFF	UniProt:M4DTP3	MapMan:35.2	:	:	:

Description

AT1G11040 (E=1e-152) | DNAJ chaperone C-terminal domain-containing protein

Coordinates

chrA06:-:3866523..3868201

Molecular Weight (calculated)

47458.1 Da

IEP (calculated)

10.575

GRAVY (calculated)

-0.739

Length

433 amino acids

Sequence
(BLAST)

001: MTTPRSPATD FFGISKTACK AYKSIVTKLH PLSSHRKTDS HSDNDSTIHQ KYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLTSAS SNRRSTFSRT TSRRDDGGGS SHGGVGRTHG LKSRPVSNSA SPMTSPFTSP RGKDQTLGDL FGSAQGLTSP PSSTPSSPKT ISKSRSKRDK
201: DGRSGSTTSF SKSTSTRHQS KRDTGGSVGR SVSRRSTTPI VFSQSTQPKK PPAVEKKLEC TLEELCHGGV KNIKITRDII TDEGLIRKQE ETLKVNIKPG
301: WKKGTKITFE GVGNEKPGYL PEDITFVVEE KRHPLFKRRG DDLEIAVEIP LVKALTGCKL SVPLLSGESM SVSVGEVIFH GFEKAIKGQG LPNAKEEGKL
401: GDLRITFLVN FPKKLSEEQR SIAYEVLKDC SWA

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.