Factsheet for Bra022249.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92166	Canola	plastid	97.6	88.51
AT3G17830.1	Thale cress	plastid	84.5	74.85
VIT_17s0000g02030.t01	Wine grape	plastid	55.24	52.6
KRH48662	Soybean	nucleus, plastid	55.46	48.38
Solyc03g118500.2.1	Tomato	plastid	53.71	46.24
PGSC0003DMT400036786	Potato	plastid	53.49	46.05
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	50.0	42.02
TraesCS4B01G241700.1	Wheat	plastid	46.72	40.0
Zm00001d028256_P002	Maize	plastid	46.29	39.41
OQU92981	Sorghum	plastid	45.85	38.96
TraesCS4D01G241300.2	Wheat	plastid	45.63	38.7
TraesCS4A01G064300.2	Wheat	plastid	45.41	38.52
Bra035201.1-P	Field mustard	plastid	41.92	38.32
Bra030245.1-P	Field mustard	plastid	37.12	37.61
HORVU4Hr1G066920.5	Barley	mitochondrion	46.51	37.5
Bra011820.1-P	Field mustard	cytosol	36.03	31.19
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	19.65	28.04
Bra009848.1-P	Field mustard	cytosol	19.21	27.85
Bra031127.1-P	Field mustard	cytosol	20.52	27.81
Bra020505.1-P	Field mustard	cytosol	19.87	27.33
Bra010892.1-P	Field mustard	mitochondrion	25.55	27.21
Bra020721.1-P	Field mustard	mitochondrion	25.98	26.62
Bra037514.1-P	Field mustard	mitochondrion	25.76	26.11
Bra018443.1-P	Field mustard	nucleus	19.87	26.07
Bra029729.1-P	Field mustard	nucleus	18.56	25.91
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	18.56	25.45
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	18.78	25.29
Bra011031.1-P	Field mustard	cytosol	19.43	25.28
Bra006608.1-P	Field mustard	nucleus	22.27	25.0
Bra002385.1-P	Field mustard	nucleus	22.93	24.88
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	17.69	24.85
Bra002386.1-P	Field mustard	nucleus	22.71	24.64
Bra033783.1-P	Field mustard	cytosol	17.47	24.62
Bra020169.1-P	Field mustard	nucleus	22.49	24.35
Bra018099.1-P	Field mustard	cytosol	17.69	24.25
Bra007687.1-P	Field mustard	golgi	17.9	23.7
Bra019519.1-P	Field mustard	cytosol	17.03	23.49
Bra003501.1-P	Field mustard	nucleus	17.25	21.29
Bra010365.1-P	Field mustard	mitochondrion	15.5	18.3
Bra036942.1-P	Field mustard	nucleus	10.92	14.33
Bra018413.1-P	Field mustard	nucleus	12.01	13.68
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	10.7	13.54
Bra019886.1-P	Field mustard	nucleus	11.35	12.01
Bra014400.1-P	Field mustard	golgi	17.25	11.83

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra022249	EnsemblPlants:Bra022249.1
EnsemblPlants:Bra022249.1-P	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009507	GO:GO:0009536	GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4E0F2	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF26	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	TIGRFAMs:TIGR02349	TMHMM:TMhelix	UniParc:UPI000254746C	SEG:seg	:

Description

AT3G17830 (E=3e-197) | DNAJ heat shock family protein

Coordinates

chrA05:-:18836793..18839219

Molecular Weight (calculated)

50768.5 Da

IEP (calculated)

9.443

GRAVY (calculated)

-0.608

Length

458 amino acids

Sequence
(BLAST)

001: MSAGKDHYKT LNVARNATLK EIKSAYRALA RKYHPDMNKN PGAEDKFKQI SAAYEVLSDE EKRSAYDRFG EAGLDGNFNP SQDASQGVDP FDLYSAFFGG
101: GSDGFFGDMG DSGGMGFDFM NKRSLDLDIR YDMRLSFEES VFGVKREIDV SYLATCDGCG GTGAKSSKDV KQCSNCGGKG RVMDTQRTPF GIMSQVSTCS
201: KCGGDGRIIT DKCRMCNGNG RLRSSKKMDL VVPPGVSDRA TMRMRGEGNV DKRSGRAGDL FIVLQVAEKR GIRREGLNLY SKITIDFTDA ILGTFTKVET
301: VEGTMDLRIP PGTQPGDTVK LCRKGVPDTD RPSVRGDHCF EVKVLIPKNL SERERKLVEE FSSLRRSSSS TETRQEEHRF DSESREKPSL WRKMKSFVRP
401: EDSRTKFGTM SLNSSVPLQR IKETGTSIVF PFLALCVIAS AVALVQKKGN RLKEKKEI

Best Arabidopsis Sequence Match ( AT3G17830.1 )
(BLAST)

001: MAAMARCALI PSINPAHSFR HQFPQPNASF YLPPTLPIFS RVRRFGISGG YRRRVITMAA GTDHYSTLNV NRNATLQEIK SSYRKLARKY HPDMNKNPGA
101: EDKFKQISAA YEVLSDEEKR SAYDRFGEAG LEGDFNGSQD TSPGVDPFDL YSAFFGGSDG FFGGMGESGG MGFDFMNKRS LDLDIRYDLR LSFEEAVFGV
201: KREIEVSYLE TCDGCGGTGA KSSNSIKQCS SCDGKGRVMN SQRTPFGIMS QVSTCSKCGG EGKTITDKCR KCIGNGRLRA RKKMDVVVPP GVSDRATMRI
301: QGEGNMDKRS GRAGDLFIVL QVDEKRGIRR EGLNLYSNIN IDFTDAILGA TTKVETVEGS MDLRIPPGTQ PGDTVKLPRK GVPDTDRPSI RGDHCFVVKI
401: SIPKKLSERE RKLVEEFSSL RRSSSSTGPT ETRQEEQSFG SEPRKEPSLW HKMKNFIRPE DSRTKFGTMS LNPSLPLRRM KVSETSIAFS VLALCVITSA
501: VALVQKKGNR LKQKKET

Arabidopsis Description

At3g17830 [Source:UniProtKB/TrEMBL;Acc:Q058J9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.