Factsheet for GSMUA_Achr9P29030_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
mitochondrion 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02030.t01	Wine grape	plastid	48.81	55.3
KRH48662	Soybean	nucleus, plastid	48.81	50.67
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	42.02	50.0
Solyc03g118500.2.1	Tomato	plastid	47.71	48.87
PGSC0003DMT400036786	Potato	plastid	47.71	48.87
CDX95817	Canola	plastid	44.4	48.11
AT3G17830.1	Thale cress	plastid	45.32	47.78
CDX92166	Canola	plastid	44.04	47.52
TraesCS4A01G064300.2	Wheat	plastid	45.69	46.11
TraesCS4B01G241700.1	Wheat	plastid	44.77	45.61
TraesCS4D01G241300.2	Wheat	plastid	44.4	44.81
HORVU4Hr1G066920.5	Barley	mitochondrion	46.24	44.37
OQU92981	Sorghum	plastid	43.85	44.34
Zm00001d028256_P002	Maize	plastid	43.3	43.87
GSMUA_Achr11P...	Banana	plastid	35.23	39.18
GSMUA_Achr3P00920_001	Banana	mitochondrion	32.48	39.16
GSMUA_Achr1P15780_001	Banana	plastid	31.38	38.43
GSMUA_Achr4P20410_001	Banana	cytosol	31.93	33.14
GSMUA_AchrUn_...	Banana	cytosol	17.43	31.77
GSMUA_AchrUn_...	Banana	cytosol	8.62	31.33
GSMUA_Achr6P13820_001	Banana	cytosol	9.36	29.82
GSMUA_Achr3P15480_001	Banana	cytosol	15.96	29.79
GSMUA_Achr8P16030_001	Banana	cytosol	17.43	28.7
GSMUA_Achr3P00410_001	Banana	mitochondrion	23.49	28.44
GSMUA_Achr4P11580_001	Banana	mitochondrion	23.12	27.88
GSMUA_Achr1P01630_001	Banana	cytosol	12.11	27.85
GSMUA_Achr11P...	Banana	cytosol	19.27	27.56
GSMUA_Achr4P12330_001	Banana	nucleus	16.51	27.44
GSMUA_Achr8P11020_001	Banana	nucleus	20.0	27.25
GSMUA_Achr2P19740_001	Banana	cytosol	15.78	26.71
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	16.7	26.45
GSMUA_Achr4P31390_001	Banana	cytosol	20.18	26.44
GSMUA_Achr7P01290_001	Banana	nucleus	20.18	26.38
GSMUA_AchrUn_...	Banana	cytosol	15.41	26.01
GSMUA_Achr6P29960_001	Banana	nucleus	19.63	25.85
GSMUA_Achr6P02160_001	Banana	mitochondrion	22.39	25.79
GSMUA_Achr9P25940_001	Banana	nucleus	19.63	25.66
GSMUA_Achr9P23300_001	Banana	cytosol	16.15	25.58
GSMUA_Achr4P22790_001	Banana	cytosol	19.45	25.36
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	17.06	24.93
GSMUA_Achr11P...	Banana	cytosol	16.7	24.33
GSMUA_Achr4P12400_001	Banana	mitochondrion	20.0	23.29
GSMUA_Achr6P15600_001	Banana	cytosol	17.8	21.95
GSMUA_Achr7P03030_001	Banana	cytosol	12.29	21.07
GSMUA_Achr8P32540_001	Banana	mitochondrion	6.42	12.59

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
EnsemblPlantsGene:GSMUA_Achr9G29030_001	EnsemblPlants:GSMUA_Achr9P29030_001	EnsemblPlants:GSMUA_Achr9T29030_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0U4G0	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF26	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	TMHMM:TMhelix	UniParc:UPI00029519FE	SEG:seg	:	:

Description

Putative Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr9G29030_001]

Coordinates

chr9:+:32824663..32833369

Molecular Weight (calculated)

60257.6 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.479

Length

545 amino acids

Sequence
(BLAST)

001: MATLRSFSFK PLAPPGHLPF FPLRPKRWTL ELASFSSSFF PGRLRFVGSQ CFVSRSSGRR RRCTPIKAKA TDYYGTLNLR RNSTLQEIKS AYRSLARKYH
101: PDMNKSPGAE EKFKEISAAY EVLSDEEKRS LYDRYGEVGL QGEYGAAGVG PQGVDPFEVF NAFFGDSSGL FGGDMDPGGF GMNSRFTRSQ GLDIRYDLSL
201: SFEESVFGSQ REVNVVRFET CDKCNGTGAK SSSCIKSCME CGGRGGVMNS QRTPFGIVSQ VSTCSKCGGN GKLVTDFCRS CNGEGKIEGH RSIKVDIPAG
301: VNDGYTIQIN GEGSYDKKRG VVGNVYLFLH VNEKPGFRRD GLNLFSEVSI DYTEAILGTV VETVEGYKDL QIPSGTQPGE TLKFTNMGVP NLRRPSVRGD
401: HHFVVRVEIP KNISDEERLR VEKLASLRAT KDSSIGSKGM HQDNMYKYSE KRKTRASRKR MNNSFWSYMK NLFGASQTGT GIASISLQAP VPAWMPHPKA
501: DPSTVAAYGA FAVTGILYLI CRISGFLSVP QKNFLTPQRS EKEDE

Best Arabidopsis Sequence Match ( AT3G17830.1 )
(BLAST)

001: MAAMARCALI PSINPAHSFR HQFPQPNASF YLPPTLPIFS RVRRFGISGG YRRRVITMAA GTDHYSTLNV NRNATLQEIK SSYRKLARKY HPDMNKNPGA
101: EDKFKQISAA YEVLSDEEKR SAYDRFGEAG LEGDFNGSQD TSPGVDPFDL YSAFFGGSDG FFGGMGESGG MGFDFMNKRS LDLDIRYDLR LSFEEAVFGV
201: KREIEVSYLE TCDGCGGTGA KSSNSIKQCS SCDGKGRVMN SQRTPFGIMS QVSTCSKCGG EGKTITDKCR KCIGNGRLRA RKKMDVVVPP GVSDRATMRI
301: QGEGNMDKRS GRAGDLFIVL QVDEKRGIRR EGLNLYSNIN IDFTDAILGA TTKVETVEGS MDLRIPPGTQ PGDTVKLPRK GVPDTDRPSI RGDHCFVVKI
401: SIPKKLSERE RKLVEEFSSL RRSSSSTGPT ETRQEEQSFG SEPRKEPSLW HKMKNFIRPE DSRTKFGTMS LNPSLPLRRM KVSETSIAFS VLALCVITSA
501: VALVQKKGNR LKQKKET

Arabidopsis Description

At3g17830 [Source:UniProtKB/TrEMBL;Acc:Q058J9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.