Factsheet for GSMUA_Achr4P12330_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P23300_001	Banana	cytosol	78.66	75.0
GSMUA_AchrUn_...	Banana	cytosol	68.29	74.92
GSMUA_AchrUn_...	Banana	cytosol	64.63	65.63
KRH52529	Soybean	cytosol	63.41	63.8
Os08t0161900-01	Rice	cytosol	66.46	63.74
Bra009848.1-P	Field mustard	cytosol	60.67	62.97
PGSC0003DMT400083824	Potato	cytosol	62.2	62.96
EES14600	Sorghum	cytosol	65.55	62.68
VIT_04s0008g04300.t01	Wine grape	cytosol	64.63	62.54
Zm00001d024527_P001	Maize	cytosol	66.16	62.36
CDX88188	Canola	cytosol	60.98	62.31
KRH61857	Soybean	cytosol, nucleus	21.95	62.07
CDX80523	Canola	cytosol	60.67	61.99
TraesCS7D01G293900.1	Wheat	cytosol	64.63	61.27
TraesCS7B01G188900.2	Wheat	cytosol	64.63	61.27
GSMUA_Achr8P16030_001	Banana	cytosol	61.59	61.03
TraesCS7A01G298000.1	Wheat	cytosol	64.33	60.98
HORVU7Hr1G070170.1	Barley	cytosol	64.33	60.98
GSMUA_Achr3P15480_001	Banana	cytosol	53.66	60.27
KRH61858	Soybean	cytosol	25.91	59.86
CDY05498	Canola	cytosol	60.67	59.76
Bra020505.1-P	Field mustard	cytosol	60.67	59.76
CDY54902	Canola	cytosol	60.67	59.76
Os02t0128400-01	Rice	cytosol	61.28	59.29
AT5G25530.1	Thale cress	cytosol	62.2	58.79
TraesCS6A01G087000.1	Wheat	cytosol	59.45	57.86
TraesCS6B01G115000.1	Wheat	cytosol	59.45	57.86
TraesCSU01G019500.1	Wheat	nucleus	59.15	57.57
KXG29372	Sorghum	cytosol	59.15	57.4
HORVU6Hr1G016170.1	Barley	cytosol	58.54	56.97
GSMUA_Achr2P19740_001	Banana	cytosol	54.88	55.9
HORVU6Hr1G016080.3	Barley	cytosol	58.23	55.85
GSMUA_Achr11P...	Banana	cytosol	58.23	51.07
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	60.37	46.7
GSMUA_Achr6P13820_001	Banana	cytosol	23.78	45.61
GSMUA_Achr6P15600_001	Banana	cytosol	57.01	42.31
GSMUA_AchrUn_...	Banana	cytosol	16.77	36.67
GSMUA_Achr7P03030_001	Banana	cytosol	32.62	33.65
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	31.1	29.65
GSMUA_Achr4P31390_001	Banana	cytosol	37.5	29.57
GSMUA_Achr4P22790_001	Banana	cytosol	37.5	29.43
GSMUA_Achr9P25940_001	Banana	nucleus	36.59	28.78
GSMUA_Achr6P29960_001	Banana	nucleus	36.28	28.74
GSMUA_Achr11P...	Banana	cytosol	33.23	28.61
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	32.32	28.42
GSMUA_Achr7P01290_001	Banana	nucleus	35.67	28.06
GSMUA_Achr8P11020_001	Banana	nucleus	34.15	28.0
GSMUA_Achr8P32540_001	Banana	mitochondrion	23.17	27.34
GSMUA_Achr1P01630_001	Banana	cytosol	17.38	24.05
GSMUA_Achr1P15780_001	Banana	plastid	30.49	22.47
GSMUA_Achr3P00920_001	Banana	mitochondrion	30.79	22.35
GSMUA_Achr11P...	Banana	plastid	30.79	20.61
GSMUA_Achr4P11580_001	Banana	mitochondrion	27.13	19.69
GSMUA_Achr3P00410_001	Banana	mitochondrion	26.22	19.11
GSMUA_Achr4P20410_001	Banana	cytosol	30.49	19.05
GSMUA_Achr6P02160_001	Banana	mitochondrion	25.3	17.55
GSMUA_Achr4P12400_001	Banana	mitochondrion	25.0	17.52
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	27.44	16.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	InterPro:DnaJ_C	InterPro:DnaJ_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
EnsemblPlantsGene:GSMUA_Achr4G12330_001	EnsemblPlants:GSMUA_Achr4P12330_001	EnsemblPlants:GSMUA_Achr4T12330_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	UniProt:M0SN98	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF435	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI000296883C
SEG:seg	:	:	:	:	:

Description

Putative DnaJ homolog subfamily B member 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G12330_001]

Coordinates

chr4:-:9109049..9112431

Molecular Weight (calculated)

36465.6 Da

IEP (calculated)

9.950

GRAVY (calculated)

-0.546

Length

328 amino acids

Sequence
(BLAST)

001: MGVDYYNILK VNRNATDEDL KKSYRRLAMR WHPDKNPSNK KEAEAKFKQI SEAYEASRVS ILSTLKLSEA QFVLSDAQKR AIYDQLGEEG LKGMPPPGSQ
101: SATSSASSGP SNFRFNPRDA KDIFAEIFGN SSPFGFESMN RTNGTQPRKA PAVENFLACR LEELYSGSKR KLKISRSVLQ SNGQLVPETE ILTIDIKPGW
201: KKGTKITFPG KGNEQVNQLP ADLVFIIDEK PHDVYKREGN DLIVHQNISL VDALAGTTIN LKTLDGRDLS INVNEVVIPG YELVVAKEGM PLAKEPGKKG
301: NLIVKFNVKF PSRLTPDQRA DIRRILGS

Best Arabidopsis Sequence Match ( AT5G25530.1 )
(BLAST)

001: MGLDYYDILK VNRNATEDDL KKSYRKLAMK WHPDKNPNTK TEAEAKFKQI SEAYEAKYEV MFQVLSDPQK RAVYDQYGEE GLSDMPPPGS TGNNGRAGGF
101: NPRNAEDIFA EFFGSSPFGF GSAGGPGRSM RFQSDGGGGM FGGFGGGNNG SENNIFRTYS EGTPAPKKPP PVESKLPCSL EELYSGSTRK MKISRSIVDA
201: NGRQAQETEI LTIVVKPGWK KGTKIKFPDK GNEQVNQLPA DLVFVIDEKP HDLFTRDGND LITSRRVTLA EAIGGTTVNI NTLDGRNLPV GVAEIVSPGY
301: EFVVPGEGMP IAKEPRNKGD LKIKFDVQFP ARLTTEQKSA LKRVLAG

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4JY55]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.