Factsheet for TraesCSU01G019500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G115000.1	Wheat	cytosol	98.81	98.81
TraesCS6A01G087000.1	Wheat	cytosol	97.63	97.63
HORVU6Hr1G016170.1	Barley	cytosol	97.03	97.03
HORVU6Hr1G016080.3	Barley	cytosol	96.74	95.32
KXG29372	Sorghum	cytosol	84.27	84.02
Os02t0128400-01	Rice	cytosol	82.49	82.01
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	83.09	66.04
GSMUA_Achr4P12330_001	Banana	nucleus	57.57	59.15
GSMUA_Achr9P23300_001	Banana	cytosol	57.57	56.4
KRH52529	Soybean	cytosol	51.93	53.68
KRH61858	Soybean	cytosol	22.55	53.52
Bra009848.1-P	Field mustard	cytosol	49.85	53.16
GSMUA_AchrUn_...	Banana	cytosol	50.74	52.94
CDX88188	Canola	cytosol	50.15	52.65
CDX80523	Canola	cytosol	50.15	52.65
KRH61857	Soybean	cytosol, nucleus	17.8	51.72
CDY54902	Canola	cytosol	51.04	51.65
CDY05498	Canola	cytosol	51.04	51.65
Bra020505.1-P	Field mustard	cytosol	51.04	51.65
AT5G25530.1	Thale cress	cytosol	52.23	50.72
PGSC0003DMT400083824	Potato	cytosol	48.66	50.62
VIT_04s0008g04300.t01	Wine grape	cytosol	50.15	49.85
TraesCSU01G059600.1	Wheat	cytosol	45.7	48.28

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF363
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCSU01G019500	EnsemblPlants:TraesCSU01G019500.1	TIGR:cd06257
TIGR:cd10747	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:20928343..20932386

Molecular Weight (calculated)

37742.8 Da

IEP (calculated)

9.810

GRAVY (calculated)

-0.750

Length

337 amino acids

Sequence
(BLAST)

001: MDYYNILKVN RNASLEDLKK SYRRLARTWH PDKNPTGGAE AEARFKQITE AYEVLSDPEK RAIYDQYGEE GLKGMPPPGS QSRTATASGS SGPSNFRYNP
101: SDPDDIFNEF MASNKPYTFG QDRRRFQPAH RTSAVNGRSE ASSSSQKEPG TSTSHLEKPP PVKKTLLCTL EELYNGTKRK MKITRNVAKS DGKVELETEI
201: LQVEVLPGWK KGTKMTFPNK GDTLPGYLPQ DLTFVIDMKP HDTYTLEGNN LLVSQEIPLV DALAGTTINL RTLDGRSLPV RVEEVVRPGQ EIVIENEGWP
301: IRKEPGKKGS LRIRFDVAFP ARLSSLQRAA IRRIMGS

Best Arabidopsis Sequence Match ( AT1G10350.1 )
(BLAST)

001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.