Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G016080.3 | Barley | cytosol | 99.7 | 98.25 |
| TraesCS6B01G115000.1 | Wheat | cytosol | 97.63 | 97.63 |
| TraesCSU01G019500.1 | Wheat | nucleus | 97.03 | 97.03 |
| TraesCS6A01G087000.1 | Wheat | cytosol | 96.44 | 96.44 |
| KXG29372 | Sorghum | cytosol | 84.87 | 84.62 |
| Os02t0128400-01 | Rice | cytosol | 82.79 | 82.3 |
| Zm00001d053972_P001 | Maize | cytosol, golgi, plasma membrane | 83.68 | 66.51 |
| GSMUA_Achr4P12330_001 | Banana | nucleus | 56.97 | 58.54 |
| GSMUA_Achr9P23300_001 | Banana | cytosol | 56.97 | 55.81 |
| HORVU7Hr1G070170.1 | Barley | cytosol | 54.9 | 53.47 |
| KRH52529 | Soybean | cytosol | 51.34 | 53.07 |
| Bra009848.1-P | Field mustard | cytosol | 49.55 | 52.85 |
| CDX80523 | Canola | cytosol | 50.15 | 52.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.45 | 52.63 |
| CDX88188 | Canola | cytosol | 49.85 | 52.34 |
| KRH61857 | Soybean | cytosol, nucleus | 17.8 | 51.72 |
| KRH61858 | Soybean | cytosol | 21.66 | 51.41 |
| CDY54902 | Canola | cytosol | 50.74 | 51.35 |
| CDY05498 | Canola | cytosol | 50.74 | 51.35 |
| Bra020505.1-P | Field mustard | cytosol | 50.74 | 51.35 |
| PGSC0003DMT400083824 | Potato | cytosol | 48.66 | 50.62 |
| AT5G25530.1 | Thale cress | cytosol | 51.63 | 50.14 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 50.15 | 49.85 |
| HORVU1Hr1G087070.1 | Barley | cytosol | 49.26 | 44.99 |
| HORVU3Hr1G032480.1 | Barley | cytosol, nucleus | 50.15 | 39.3 |
| HORVU3Hr1G113710.2 | Barley | plastid | 37.09 | 36.87 |
| HORVU1Hr1G015040.2 | Barley | plastid | 40.95 | 36.03 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 32.94 | 34.26 |
| HORVU1Hr1G015060.2 | Barley | plastid | 24.63 | 29.12 |
| HORVU5Hr1G103680.1 | Barley | cytosol | 33.83 | 27.08 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 18.1 | 26.29 |
| HORVU5Hr1G092610.3 | Barley | nucleus | 31.45 | 25.12 |
| HORVU1Hr1G022990.1 | Barley | cytosol | 29.97 | 23.76 |
| HORVU0Hr1G016360.1 | Barley | cytosol | 11.57 | 22.03 |
| HORVU0Hr1G018300.1 | Barley | plastid | 30.86 | 21.49 |
| HORVU6Hr1G065410.3 | Barley | cytosol, mitochondrion | 16.91 | 19.52 |
| HORVU0Hr1G000620.4 | Barley | plastid | 22.26 | 18.99 |
| HORVU5Hr1G036400.3 | Barley | plastid | 23.44 | 18.5 |
| HORVU7Hr1G009230.8 | Barley | plastid | 24.04 | 18.2 |
| HORVU0Hr1G017450.8 | Barley | cytosol | 25.82 | 17.98 |
| HORVU5Hr1G037600.2 | Barley | cytosol, nucleus | 28.49 | 16.47 |
| HORVU4Hr1G066920.5 | Barley | mitochondrion | 25.52 | 15.14 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | EMBL:AK363296 | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | UniProt:F2DHC9 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | EnsemblPlantsGene:HORVU6Hr1G016170 | EnsemblPlants:HORVU6Hr1G016170.1 | InterPro:HSP40/DnaJ_pept-bd |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 | PFAM:PF01556 | PRINTS:PR00625 |
| ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF363 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | UniParc:UPI000200637E | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DHC9]
Coordinates
chrchr6H:+:36128959..36133141
Molecular Weight (calculated)
37838.8 Da
IEP (calculated)
9.608
GRAVY (calculated)
-0.789
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYYNILKVN RNASLEDLKK SYRRLARTWH PDKNPTGGAE AEARFKQITE AYEVLSDPEK RAIYDQYGEE GLKGMPPPGS QSRTSTASGS TGPNNFRYNP
101: SDPDEFFNEF MASNKPYTFG QDRRRFQPAH RTSATNGRSE ASSSSQKEPG TSTSHLEKPP PVEKTLLCTL EELYNGTKRK MKITRNVAKS DGKVEVETEI
201: LQVEVLPGWK KGTKMTFPNK GDTLPGYLPQ DLTFVIDMKP HDTYTLEGNN LLVSQEIPLV DALAGTTINL RTLDGRSLPV RVEEVVRPGQ EIVIENEGWP
301: IRKEPGKKGS LRIRFDVAFP VRLSSSQRAA IRRIMGS
101: SDPDEFFNEF MASNKPYTFG QDRRRFQPAH RTSATNGRSE ASSSSQKEPG TSTSHLEKPP PVEKTLLCTL EELYNGTKRK MKITRNVAKS DGKVEVETEI
201: LQVEVLPGWK KGTKMTFPNK GDTLPGYLPQ DLTFVIDMKP HDTYTLEGNN LLVSQEIPLV DALAGTTINL RTLDGRSLPV RVEEVVRPGQ EIVIENEGWP
301: IRKEPGKKGS LRIRFDVAFP VRLSSSQRAA IRRIMGS
001: MGLDYYDILK VNRNATEDDL KKSYRKLAMK WHPDKNPNTK TEAEAKFKQI SEAYEVLSDP QKRAVYDQYG EEGLSDMPPP GSTGNNGRAG GFNPRNAEDI
101: FAEFFGSSPF GFGSAGGPGR SMRFQSDGGG GMFGGFGGGN NGSENNIFRT YSEGTPAPKK PPPVESKLPC SLEELYSGST RKMKISRSIV DANGRQAQET
201: EILTIVVKPG WKKGTKIKFP DKGNEQVNQL PADLVFVIDE KPHDLFTRDG NDLITSRRVT LAEAIGGTTV NINTLDGRNL PVGVAEIVSP GYEFVVPGEG
301: MPIAKEPRNK GDLKIKFDVQ FPARLTTEQK SALKRVLAG
101: FAEFFGSSPF GFGSAGGPGR SMRFQSDGGG GMFGGFGGGN NGSENNIFRT YSEGTPAPKK PPPVESKLPC SLEELYSGST RKMKISRSIV DANGRQAQET
201: EILTIVVKPG WKKGTKIKFP DKGNEQVNQL PADLVFVIDE KPHDLFTRDG NDLITSRRVT LAEAIGGTTV NINTLDGRNL PVGVAEIVSP GYEFVVPGEG
301: MPIAKEPRNK GDLKIKFDVQ FPARLTTEQK SALKRVLAG
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4JY55]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.