Factsheet for HORVU6Hr1G065410.3

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	46.23	73.37
Zm00001d006666_P001	Maize	nucleus	57.19	57.0
Zm00001d006563_P001	Maize	mitochondrion	51.71	55.51
HORVU5Hr1G103680.1	Barley	cytosol	79.79	55.34
Zm00001d045645_P001	Maize	cytosol	50.34	55.26
Zm00001d006230_P001	Maize	cytosol	54.79	55.17
TraesCS5B01G428000.1	Wheat	nucleus	79.45	55.11
TraesCS5A01G426100.1	Wheat	nucleus	79.45	55.11
TraesCS5D01G434100.1	Wheat	nucleus	79.45	55.11
KXG37403	Sorghum	cytosol	74.66	52.15
Zm00001d013111_P001	Maize	extracellular, plasma membrane	74.32	52.04
Os03t0787300-01	Rice	plasma membrane	73.97	51.8
Zm00001d034368_P001	Maize	extracellular, plasma membrane	73.63	51.44
KRH26709	Soybean	nucleus	71.92	50.36
KRH25334	Soybean	nucleus	71.58	50.12
KRH22611	Soybean	nucleus	71.58	50.12
KRG88903	Soybean	nucleus	70.89	49.64
Zm00001d048538_P001	Maize	nucleus	55.14	49.54
VIT_06s0080g01230.t01	Wine grape	cytosol	70.55	49.4
Solyc04g009770.2.1	Tomato	nucleus	70.55	49.28
VIT_13s0073g00560.t01	Wine grape	cytosol	69.52	48.8
HORVU5Hr1G092610.3	Barley	nucleus	70.21	48.58
PGSC0003DMT400065401	Potato	nucleus	69.52	48.45
Zm00001d004840_P001	Maize	mitochondrion	56.16	47.81
Zm00001d026185_P001	Maize	endoplasmic reticulum	70.21	40.76
HORVU0Hr1G016360.1	Barley	cytosol	24.66	40.68
HORVU0Hr1G018300.1	Barley	plastid	62.67	37.81
HORVU7Hr1G070170.1	Barley	cytosol	21.23	17.92
HORVU1Hr1G087070.1	Barley	cytosol	22.26	17.62
HORVU1Hr1G022990.1	Barley	cytosol	25.0	17.18
HORVU6Hr1G016170.1	Barley	cytosol	19.52	16.91
HORVU3Hr1G113710.2	Barley	plastid	19.52	16.81
HORVU3Hr1G081940.1	Barley	cytosol	18.49	16.67
HORVU6Hr1G016080.3	Barley	cytosol	19.52	16.67
HORVU1Hr1G015040.2	Barley	plastid	21.23	16.19
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	21.58	14.65
HORVU0Hr1G017450.8	Barley	cytosol	21.92	13.22
HORVU7Hr1G009230.8	Barley	plastid	18.84	12.36
HORVU5Hr1G036400.3	Barley	plastid	17.47	11.94
HORVU0Hr1G000620.4	Barley	plastid	15.41	11.39
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	21.23	10.63
HORVU4Hr1G066920.5	Barley	mitochondrion	20.21	10.39
HORVU1Hr1G015060.2	Barley	plastid	8.9	9.12
HORVU7Hr1G073040.2	Barley	cytosol	5.48	6.9

Protein Annotations

MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A287UGY3	InterPro:DnaJ_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	EnsemblPlantsGene:HORVU6Hr1G065410	EnsemblPlants:HORVU6Hr1G065410.3	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	PFAM:PF00684	PFAM:PF01556	PFscan:PS51188	PANTHER:PTHR43888
PANTHER:PTHR43888:SF15	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI000B4767A7	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:449542733..449544276

Molecular Weight (calculated)

32589.6 Da

IEP (calculated)

9.964

GRAVY (calculated)

-0.569

Length

292 amino acids

Sequence
(BLAST)

001: YVPFNSPFKY LIVGAFPGRG GGSSRGRRQR RGEDLVHPVK VSLEELYNGT SKKLSLARNV LCSKCNGKGS KSGASMKCVG CQGVGYKVQI RQLGPGMIQQ
101: MQQPCNETRG SDETISDKDR CGQCKGEKVV HEKKVLEVVV KKGMQHGQKI TFPGEADEAP NTITGDIIFV LQQKEHPKFK RKADDLFYEH TLTLTKAMCG
201: FQYVLAHLDC RQLLIKSNPG EVVKRDSFKA INDEGMPMYQ RPFTKGKLYM HSKRTQRRLI CSSFLANFGI LEPIKAGIRD AKLGVGKQEE DD

Best Arabidopsis Sequence Match ( AT3G44110.1 )
(BLAST)

001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ

Arabidopsis Description

ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.