Factsheet for HORVU1Hr1G087070.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G403500.1	Wheat	cytosol	93.77	95.84
TraesCS1A01G395300.1	Wheat	cytosol	94.85	94.09
TraesCS1B01G423600.1	Wheat	cytosol	95.94	93.65
Zm00001d039000_P001	Maize	mitochondrion	86.45	88.12
EES19943	Sorghum	cytosol	85.91	87.57
Os05t0562300-01	Rice	nucleus	85.64	87.29
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	81.57	85.75
GSMUA_Achr3P15480_001	Banana	cytosol	63.41	80.14
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	69.38	74.85
Solyc07g053620.2.1	Tomato	nucleus	42.82	70.54
HORVU7Hr1G070170.1	Barley	cytosol	53.12	56.65
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	64.5	55.35
GSMUA_Achr6P13820_001	Banana	cytosol	25.2	54.39
HORVU1Hr1G015040.2	Barley	plastid	53.39	51.44
HORVU6Hr1G016170.1	Barley	cytosol	44.99	49.26
HORVU6Hr1G016080.3	Barley	cytosol	44.99	48.54
HORVU3Hr1G113710.2	Barley	plastid	37.4	40.71
HORVU1Hr1G015060.2	Barley	plastid	29.54	38.25
HORVU3Hr1G081940.1	Barley	cytosol	31.71	36.11
HORVU5Hr1G103680.1	Barley	cytosol	34.15	29.93
HORVU5Hr1G092610.3	Barley	nucleus	33.6	29.38
HORVU1Hr1G022990.1	Barley	cytosol	32.52	28.24
HORVU0Hr1G018300.1	Barley	plastid	33.06	25.21
HORVU7Hr1G073040.2	Barley	cytosol	15.72	25.0
HORVU0Hr1G016360.1	Barley	cytosol	11.92	24.86
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	17.62	22.26
HORVU7Hr1G009230.8	Barley	plastid	26.56	22.02
HORVU5Hr1G036400.3	Barley	plastid	25.47	22.01
HORVU0Hr1G017450.8	Barley	cytosol	28.73	21.9
HORVU0Hr1G000620.4	Barley	plastid	23.04	21.52
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	28.46	18.01
HORVU4Hr1G066920.5	Barley	mitochondrion	27.37	17.78

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.20.25.170	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	EnsemblPlantsGene:HORVU1Hr1G087070	EnsemblPlants:HORVU1Hr1G087070.1	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0VDD7	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI000295C240	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:538658617..538661825

Molecular Weight (calculated)

39375.0 Da

IEP (calculated)

9.422

GRAVY (calculated)

-0.496

Length

369 amino acids

Sequence
(BLAST)

001: MGLDYYKILG VDKAASDDDL KKAYRKLAMK WHPDKNPTNK KEAESKFKQI SEAYEVLSDS QKRAVYDQYG EEGLKGQVPP PGAGGAGGPG GATFFSTGSD
101: GPTAFRFNPR NAEDIFAEFF GSSSPFGGMG GGMGGMGGMG GGHGMPSGGI RFSPSMFGGG GDHAFTQTFG GHGGGDGYSG MFGGGGRPVK VAPIERKLPC
201: SLEELYKGTT KKMKISREIA DASGKTIPVE EILTIDVKPG WKKGTKITFP EKGNEQPNTI AADLVFIIDE KPHPVYTRDG NDLVVMQKIP LAEALTGYTV
301: HLTTLDGRSL TVPISSVIHP GYEEVLRGEG MPFPKDPSRK GNLRVKFDIK FPARLTADQK SGVKRLLGQ

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.