Factsheet for TraesCS1D01G403500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G395300.1	Wheat	cytosol	98.34	95.43
TraesCS1B01G423600.1	Wheat	cytosol	99.45	94.97
HORVU1Hr1G087070.1	Barley	cytosol	95.84	93.77
Zm00001d039000_P001	Maize	mitochondrion	86.98	86.74
EES19943	Sorghum	cytosol	86.43	86.19
Os05t0562300-01	Rice	nucleus	86.15	85.91
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	82.83	85.19
GSMUA_Achr3P15480_001	Banana	cytosol	64.82	80.14
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	70.64	74.56
Solyc07g053620.2.1	Tomato	nucleus	43.49	70.09
TraesCS3D01G168500.1	Wheat	cytosol	64.27	67.25
TraesCS7D01G293900.1	Wheat	cytosol	53.74	56.07
TraesCS1D01G072800.1	Wheat	nucleus	53.19	55.81
GSMUA_Achr6P13820_001	Banana	cytosol	25.48	53.8
TraesCS1D01G267500.1	Wheat	cytosol	32.69	35.65
TraesCS3D01G379400.1	Wheat	cytosol	31.86	35.38
TraesCS1D01G107200.1	Wheat	nucleus	32.96	34.0
TraesCS5D01G434100.1	Wheat	nucleus	34.35	29.45
TraesCS5D01G382400.1	Wheat	plastid	33.52	28.74
TraesCS6D01G232600.1	Wheat	nucleus	32.41	27.53
TraesCS7D01G045900.2	Wheat	mitochondrion	27.42	24.81
TraesCS6D01G356800.1	Wheat	plastid	29.36	21.81
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	24.93	21.38
TraesCS7D01G177900.1	Wheat	mitochondrion	25.76	19.42
TraesCS4D01G241300.2	Wheat	plastid	28.53	19.07
TraesCS5D01G125500.1	Wheat	nucleus	28.25	18.96

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.20.25.170	Gene3D:2.60.260.20	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150
GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078
PANTHER:PTHR24078:SF520	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCS1D01G403500	EnsemblPlants:TraesCS1D01G403500.1
TIGR:cd06257	TIGR:cd10747	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:467935742..467938371

Molecular Weight (calculated)

38545.0 Da

IEP (calculated)

9.422

GRAVY (calculated)

-0.495

Length

361 amino acids

Sequence
(BLAST)

001: MGLDYYKILG VDKAASDDDL KKAYRKLAMK WHPDKNPTNK KEAESKFKQI SEAYEVLSDS QKRAVYDQYG EEGLKGQVPP PGAGGGAGGP AGATFFSTGA
101: DGPTAFRFNP RNAEDIFAEF FGSSSPFGGM GGMGGGGHGM PSGGIRFSPS MFGGGGDHTF TQTFGGGGQG YPGMFGGGAP VKAAPIERKL PCSLEELYKG
201: TTKKMKISRE IADASGKTIP VEEILTIDVK PGWKKGTKIT FPEKGNEQPH TIAADLVFII DEKPHPVYTR DGNDLVATQK IPLAEALTGY TVHLTTLDGR
301: SLTVPISSVI HPGYEEVVRG EGMPIPKDPS RKGNLRVKFD IKFPARLTAD QKSGVKRLLG Q

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.