Factsheet for GSMUA_Achr3P15480_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
golgi 1
nucleus 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P16030_001	Banana	cytosol	80.14	70.69
GSMUA_Achr2P19740_001	Banana	cytosol	77.05	69.88
EES19943	Sorghum	cytosol	82.88	66.85
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	79.11	65.81
Zm00001d039000_P001	Maize	mitochondrion	81.51	65.75
Os05t0562300-01	Rice	nucleus	80.82	65.19
TraesCS1D01G403500.1	Wheat	cytosol	80.14	64.82
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	74.32	63.45
HORVU1Hr1G087070.1	Barley	cytosol	80.14	63.41
TraesCS1A01G395300.1	Wheat	cytosol	79.45	62.37
TraesCS1B01G423600.1	Wheat	cytosol	80.14	61.9
GSMUA_Achr11P...	Banana	cytosol	78.42	61.23
GSMUA_AchrUn_...	Banana	cytosol	61.64	60.2
GSMUA_Achr4P12330_001	Banana	nucleus	60.27	53.66
Solyc07g053620.2.1	Tomato	nucleus	40.75	53.12
GSMUA_Achr6P13820_001	Banana	cytosol	29.79	50.88
GSMUA_Achr9P23300_001	Banana	cytosol	57.53	48.84
GSMUA_AchrUn_...	Banana	cytosol	53.77	48.61
GSMUA_Achr6P15600_001	Banana	cytosol	66.44	43.89
GSMUA_AchrUn_...	Banana	cytosol	19.52	38.0
GSMUA_Achr7P03030_001	Banana	cytosol	38.7	35.53
GSMUA_Achr8P33890_001	Banana	endoplasmic reticulum	35.96	30.52
GSMUA_Achr11P...	Banana	cytosol	39.38	30.18
GSMUA_Achr11P...	Banana	cytosol, endoplasmic reticulum, vacuole	35.96	28.15
GSMUA_Achr4P31390_001	Banana	cytosol	40.07	28.12
GSMUA_Achr9P25940_001	Banana	nucleus	40.07	28.06
GSMUA_Achr6P29960_001	Banana	nucleus	39.73	28.02
GSMUA_Achr8P11020_001	Banana	nucleus	37.67	27.5
GSMUA_Achr1P01630_001	Banana	cytosol	22.26	27.43
GSMUA_Achr8P32540_001	Banana	mitochondrion	26.03	27.34
GSMUA_Achr7P01290_001	Banana	nucleus	38.7	27.1
GSMUA_Achr4P22790_001	Banana	cytosol	38.7	27.03
GSMUA_Achr1P15780_001	Banana	plastid	30.82	20.22
GSMUA_Achr3P00920_001	Banana	mitochondrion	30.82	19.91
GSMUA_Achr11P...	Banana	plastid	32.53	19.39
GSMUA_Achr4P11580_001	Banana	mitochondrion	28.08	18.14
GSMUA_Achr3P00410_001	Banana	mitochondrion	27.05	17.56
GSMUA_Achr4P20410_001	Banana	cytosol	31.51	17.52
GSMUA_Achr4P12400_001	Banana	mitochondrion	26.37	16.45
GSMUA_Achr6P02160_001	Banana	mitochondrion	26.37	16.28
GSMUA_Achr9P29030_001	Banana	mitochondrion, plastid	29.79	15.96

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	EnsemblPlantsGene:GSMUA_Achr3G15480_001	EnsemblPlants:GSMUA_Achr3P15480_001	EnsemblPlants:GSMUA_Achr3T15480_001	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0SEW4	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002966410	SEG:seg	:	:	:

Description

Putative DnaJ homolog subfamily B member 13 [Source:GMGC_GENE;Acc:GSMUA_Achr3G15480_001]

Coordinates

chr3:+:16514700..16516084

Molecular Weight (calculated)

32322.8 Da

IEP (calculated)

9.712

GRAVY (calculated)

-0.695

Length

292 amino acids

Sequence
(BLAST)

001: MGADYYKILG VDKSAKDDDL KKAYRKLAMK WHPDKNPNNK NEAEAKFKQI SEAYEVLSDP QKRAIYDQYG EEGLKGQVPP PEANGGATFF SGGGDGARSN
101: GGGPMNSRRP QKAAPIENLL PCSLEELYKG TTKRMKISRE IADMSGKTMP VEEILTIDIK PGWKKGTKIT FEEKGNERPN VIPADVVFII DEKPHPVFTR
201: EGNDLVTTKK ISLAEALTGY TAHLTTLDGR SLIVPVDSVI RPGYEEVVPK EGMPLPKDPS RKGNLRIKFD IKFPTRLTSE QKAGIKRLLP SP

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.