Factsheet for Zm00001d009556_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
cytoskeleton 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039000_P001	Maize	mitochondrion	94.3	91.44
EES19943	Sorghum	cytosol	93.45	90.61
Os05t0562300-01	Rice	nucleus	90.31	87.57
TraesCS1D01G403500.1	Wheat	cytosol	85.19	82.83
HORVU1Hr1G087070.1	Barley	cytosol	85.75	81.57
TraesCS1A01G395300.1	Wheat	cytosol	85.47	80.65
TraesCS1B01G423600.1	Wheat	cytosol	86.32	80.16
GSMUA_Achr3P15480_001	Banana	cytosol	65.81	79.11
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	72.08	73.98
Zm00001d016440_P001	Maize	cytosol	69.8	70.81
Solyc07g053620.2.1	Tomato	nucleus	44.44	69.64
Zm00001d009027_P001	Maize	cytosol	64.67	67.56
Zm00001d010958_P001	Maize	cytosol	56.7	61.04
Zm00001d024527_P001	Maize	cytosol	54.7	55.17
GSMUA_Achr6P13820_001	Banana	cytosol	26.78	54.97
Zm00001d039259_P001	Maize	nucleus	64.96	52.9
Zm00001d032347_P001	Maize	cytosol	50.14	51.61
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	46.44	38.44
Zm00001d012242_P001	Maize	cytosol	33.62	37.34
Zm00001d009783_P004	Maize	mitochondrion	33.62	33.71
Zm00001d037586_P001	Maize	endoplasmic reticulum	34.19	32.7
Zm00001d038250_P001	Maize	cytosol	30.2	31.64
Zm00001d013111_P001	Maize	extracellular, plasma membrane	37.04	31.18
Zm00001d034368_P001	Maize	extracellular, plasma membrane	36.75	30.86
Zm00001d033210_P002	Maize	nucleus	35.33	29.59
Zm00001d042653_P001	Maize	plastid	33.33	29.25
Zm00001d017476_P001	Maize	plasma membrane	34.76	28.91
Zm00001d013669_P002	Maize	cytosol	35.04	27.39
Zm00001d048538_P001	Maize	nucleus	24.22	26.15
Zm00001d009210_P001	Maize	endoplasmic reticulum	28.49	24.63
Zm00001d026185_P001	Maize	endoplasmic reticulum	33.62	23.46
Zm00001d024635_P001	Maize	mitochondrion	31.34	22.31
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	31.05	22.02
Zm00001d035975_P001	Maize	mitochondrion	26.78	21.91
Zm00001d035974_P001	Maize	mitochondrion	26.5	21.68
Zm00001d006666_P001	Maize	nucleus	17.66	21.16
Zm00001d023537_P002	Maize	mitochondrion	25.07	20.71
Zm00001d006230_P001	Maize	cytosol	17.09	20.69
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	10.54	20.11
Zm00001d006563_P001	Maize	mitochondrion	15.38	19.85
Zm00001d018413_P003	Maize	mitochondrion	30.48	18.8
Zm00001d047195_P001	Maize	mitochondrion	17.09	18.18
Zm00001d028256_P002	Maize	plastid	27.64	18.03
Zm00001d045645_P001	Maize	cytosol	13.39	17.67
Zm00001d004840_P001	Maize	mitochondrion	16.81	17.2
Zm00001d052001_P002	Maize	plastid	29.63	16.94
Zm00001d044878_P002	Maize	mitochondrion	20.23	14.49

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100382308	MapMan:19.1.5.2	Gene3D:2.60.260.20	ProteinID:AQK92086.1	EMBL:BT063846
UniProt:C0P6C7	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0001948BAC	EnsemblPlantsGene:Zm00001d009556	EnsemblPlants:Zm00001d009556_P001	EnsemblPlants:Zm00001d009556_T001	SEG:seg

Description

HSP40/DnaJ peptide-binding protein

Coordinates

chr8:-:70020675..70022622

Molecular Weight (calculated)

37830.2 Da

IEP (calculated)

9.633

GRAVY (calculated)

-0.528

Length

351 amino acids

Sequence
(BLAST)

001: MGLDYYKILG VDKGATDDDL KKAYRKLAMK WHPDKNPNNK KEAENKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGQVPP PGAGGAGSTF FSTGGDGPTV
101: FRFNPRNADD IFAEFFGGSS PFGGMGGSGM PGMRAGGSRF SSSIFGDDMF GSAFGGGGPD GHGMHTGGRA VKAPAIERKL PCSLEELYKG TTKKMKISRE
201: IADASGKTMP VEEILTIDVK PGWKKGTKIT FPEKGNETPH TIPADLVFII DEKPHPVFTR DGNDLVVTQK VPLAEALTGH TARLATLDGR ILTVPISSVI
301: HPGYEEVVRG EGMPVPKDPS RKGNLRIKFD IKFPARLSAD QKSGVKRLLG Q

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.