Factsheet for Zm00001d035975_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

mitochondrion: 29575040

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035974_P001	Maize	mitochondrion	97.67	97.67
EER89093	Sorghum	mitochondrion, plastid	90.21	88.97
Os06t0116800-01	Rice	mitochondrion	81.59	79.19
TraesCS7D01G045900.2	Wheat	mitochondrion	71.33	76.69
TraesCS7A01G051000.1	Wheat	mitochondrion	75.99	74.26
HORVU7Hr1G009230.8	Barley	plastid	74.13	71.46
GSMUA_Achr4P11580_001	Banana	mitochondrion	71.56	67.92
GSMUA_Achr3P00410_001	Banana	mitochondrion	68.3	65.11
VIT_13s0064g01360.t01	Wine grape	mitochondrion	65.73	62.53
KRH27511	Soybean	mitochondrion	62.24	60.27
KRH36456	Soybean	mitochondrion	61.77	59.82
KRH43470	Soybean	mitochondrion	60.61	58.56
Solyc01g086740.2.1	Tomato	mitochondrion	59.91	58.01
KRH13903	Soybean	mitochondrion	59.67	57.66
PGSC0003DMT400064990	Potato	mitochondrion	59.44	57.56
CDY54516	Canola	mitochondrion	58.97	55.85
Bra037514.1-P	Field mustard	mitochondrion	58.74	55.75
Bra020721.1-P	Field mustard	mitochondrion	58.04	55.7
CDY45921	Canola	mitochondrion	58.04	55.7
CDY35761	Canola	mitochondrion	58.04	55.7
AT5G48030.1	Thale cress	mitochondrion	59.21	55.7
Zm00001d023537_P002	Maize	mitochondrion	55.01	55.53
CDX86330	Canola	mitochondrion	58.51	55.04
GSMUA_Achr4P12400_001	Banana	mitochondrion	58.74	53.85
Zm00001d024635_P001	Maize	mitochondrion	34.03	29.61
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	33.33	28.89
Zm00001d039000_P001	Maize	mitochondrion	23.08	27.35
Zm00001d034368_P001	Maize	extracellular, plasma membrane	26.57	27.27
Zm00001d009783_P004	Maize	mitochondrion	22.14	27.14
Zm00001d013111_P001	Maize	extracellular, plasma membrane	26.34	27.1
Zm00001d024527_P001	Maize	cytosol	21.91	27.01
Zm00001d037586_P001	Maize	endoplasmic reticulum	23.08	26.98
Zm00001d047195_P001	Maize	mitochondrion	20.75	26.97
Zm00001d044878_P002	Maize	mitochondrion	30.77	26.94
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	21.91	26.78
Zm00001d016440_P001	Maize	cytosol	21.21	26.3
Zm00001d010958_P001	Maize	cytosol	19.81	26.07
Zm00001d017476_P001	Maize	plasma membrane	25.41	25.83
Zm00001d033210_P002	Maize	nucleus	24.94	25.54
Zm00001d009027_P001	Maize	cytosol	19.81	25.3
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	10.49	24.46
Zm00001d032347_P001	Maize	cytosol	19.35	24.34
Zm00001d048538_P001	Maize	nucleus	18.41	24.31
Zm00001d013669_P002	Maize	cytosol	25.17	24.05
Zm00001d018413_P003	Maize	mitochondrion	30.77	23.2
Zm00001d028256_P002	Maize	plastid	28.67	22.86
Zm00001d026185_P001	Maize	endoplasmic reticulum	26.34	22.47
Zm00001d009210_P001	Maize	endoplasmic reticulum	20.98	22.17
Zm00001d006666_P001	Maize	nucleus	14.92	21.84
Zm00001d012242_P001	Maize	cytosol	16.08	21.84
Zm00001d052001_P002	Maize	plastid	31.24	21.82
Zm00001d006563_P001	Maize	mitochondrion	13.29	20.96
Zm00001d039259_P001	Maize	nucleus	20.75	20.65
Zm00001d038250_P001	Maize	cytosol	15.62	20.0
Zm00001d006230_P001	Maize	cytosol	13.29	19.66
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	18.88	19.1
Zm00001d004840_P001	Maize	mitochondrion	14.45	18.08
Zm00001d042653_P001	Maize	plastid	15.85	17.0
Zm00001d045645_P001	Maize	cytosol	10.49	16.92

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ProteinID:AQK80053.1	UniProt:B4FVD3
EMBL:BT041071	ncoils:Coil	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI00017B76FA
EnsemblPlantsGene:Zm00001d035975	EnsemblPlants:Zm00001d035975_P001	EnsemblPlants:Zm00001d035975_T001	SEG:seg	:	:

Description

Chaperone protein dnaJ GFA2 mitochondrial

Coordinates

chr6:-:63921812..63926812

Molecular Weight (calculated)

46324.7 Da

IEP (calculated)

8.888

GRAVY (calculated)

-0.561

Length

429 amino acids

Sequence
(BLAST)

001: MRLHAGARLA LLLARRSLSS SPRIPRVHTG IRSEAPSRSS PFYPPSSARR SFHGTRPVAA RDYYDVLGVS KSASQAEIKK AYYGLAKKLH PDTNKGDADA
101: ERKFQEVQRA YETLKDEQKR SLYDQVGPDQ YEKTASGGGG TGFEGGFGNP FEDIFGGGGG GGGMNDFFRN IFGDRDFRGR DVKVALELSF MEAVQGCSKT
201: VTFQTSVTCE ICGGAGVPPG TTPETCLSCR GSGFIFMQTG PFRMQSTCTK CGGSGKTVKE FCKACRGNKV VPGRKSVRLD ILPGLDNEDT IKVVRSGGED
301: PDGRPGDLYV TLEVREDPVF RREKGDIHVD AVLNVTQAIL GGTVQVPTLS GDVVLKVKPG TQPGQKVVLR GKGIKTRNSP HYGDQYVHFN VNIPENLTSR
401: QRELIEEFAK EEQGEDEKDA KAAAGASGG

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.