Factsheet for Solyc01g086740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400064990	Potato	mitochondrion	98.42	98.42
VIT_13s0064g01360.t01	Wine grape	mitochondrion	68.4	67.18
KRH27511	Soybean	mitochondrion	65.01	65.01
KRH36456	Soybean	mitochondrion	63.88	63.88
KRH43470	Soybean	mitochondrion	63.43	63.29
KRH13903	Soybean	mitochondrion	63.21	63.06
Bra020721.1-P	Field mustard	mitochondrion	62.08	61.52
CDY45921	Canola	mitochondrion	62.08	61.52
CDY35761	Canola	mitochondrion	61.85	61.3
CDY54516	Canola	mitochondrion	62.3	60.93
GSMUA_Achr4P11580_001	Banana	mitochondrion	62.08	60.84
AT5G48030.1	Thale cress	mitochondrion	62.3	60.53
Bra037514.1-P	Field mustard	mitochondrion	61.63	60.4
TraesCS7D01G045900.2	Wheat	mitochondrion	54.18	60.15
Zm00001d035975_P001	Maize	mitochondrion	58.01	59.91
EER89093	Sorghum	mitochondrion, plastid	58.69	59.77
Zm00001d035974_P001	Maize	mitochondrion	57.79	59.67
CDX86330	Canola	mitochondrion	61.4	59.65
GSMUA_Achr3P00410_001	Banana	mitochondrion	59.82	58.89
TraesCS7A01G051000.1	Wheat	mitochondrion	55.98	56.49
Os06t0116800-01	Rice	mitochondrion	55.98	56.11
EES15725	Sorghum	mitochondrion, plastid	52.82	55.85
HORVU7Hr1G009230.8	Barley	plastid	55.76	55.51
Os12t0168400-01	Rice	plastid	51.92	54.89
HORVU5Hr1G036400.3	Barley	plastid	52.6	54.57
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	51.47	54.16
TraesCS5A01G117600.1	Wheat	plastid	51.24	53.92
TraesCS5D01G129700.1	Wheat	mitochondrion, plastid	51.02	53.68
Zm00001d023537_P002	Maize	mitochondrion	51.24	53.41
GSMUA_Achr4P12400_001	Banana	mitochondrion	49.89	47.22
Solyc01g105340.2.1	Tomato	plastid	30.25	37.96
Solyc01g081330.2.1	Tomato	plastid	31.83	32.49
Solyc03g116790.2.1	Tomato	plastid	30.47	27.11
Solyc11g071830.1.1	Tomato	plastid	25.28	26.79
Solyc05g006820.2.1	Tomato	plastid	18.74	26.69
Solyc09g005350.2.1	Tomato	nucleus, plastid	20.09	26.18
Solyc01g079610.2.1	Tomato	nucleus	20.32	26.09
Solyc11g006460.1.1	Tomato	nucleus	24.61	26.01
Solyc05g055160.2.1	Tomato	nucleus	24.38	25.78
Solyc02g077670.2.1	Tomato	cytosol	19.86	25.66
Solyc04g009770.2.1	Tomato	nucleus	23.93	25.36
Solyc04g005820.2.1	Tomato	cytosol, nucleus	18.28	25.31
Solyc01g090550.2.1	Tomato	nucleus	23.7	24.76
Solyc06g071110.2.1	Tomato	nucleus	18.51	24.33
Solyc07g053620.2.1	Tomato	nucleus	12.19	24.11
Solyc03g118500.2.1	Tomato	plastid	28.67	23.87
Solyc05g050810.2.1	Tomato	nucleus	13.32	22.96
Solyc11g044450.1.1	Tomato	nucleus	14.22	18.31
Solyc10g084300.1.1	Tomato	nucleus	9.71	16.29
Solyc05g050820.2.1	Tomato	cytosol	8.58	15.97
Solyc03g007650.1.1	Tomato	cytosol, mitochondrion, nucleus	9.48	15.38
Solyc06g060240.1.1	Tomato	cytosol	10.38	11.98

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000003	GO:GO:0000166	GO:GO:0000740	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006457	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008219	GO:GO:0009408	GO:GO:0009553	GO:GO:0009558	GO:GO:0009628	GO:GO:0009653
GO:GO:0009856	GO:GO:0009987	GO:GO:0010197	GO:GO:0010198	GO:GO:0016043	GO:GO:0030154
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	GO:GO:0051085	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K4AY67
HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF25	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	EnsemblPlantsGene:Solyc01g086740.2	EnsemblPlants:Solyc01g086740.2.1	TIGRFAMs:TIGR02349	UniParc:UPI0002762D73
SEG:seg	:	:	:	:	:

Description

Chaperone protein dnaJ GFA2, mitochondrial [Source:Projected from Arabidopsis thaliana (AT5G48030) UniProtKB/Swiss-Prot;Acc:Q8GWW8]

Coordinates

chr1:+:81686985..81696553

Molecular Weight (calculated)

47990.8 Da

IEP (calculated)

8.749

GRAVY (calculated)

-0.504

Length

443 amino acids

Sequence
(BLAST)

001: MVSSNGLRLA HRLARCTFSS TTGSLLKEGC RGYNTAVCNQ TRGLFYFNSK NGGSERDWLR LGQFKSNFGA TRSIHGTGMS MKDFYEVLGV NRNATASEIK
101: KAYYGLAKQL HPDMNKDDPD AEKKFQEVSK AYEVLKDDST REQYDQLGHD AFNNMNSGGG GGPGFDPFGG FKSPFEDMFK NADIFGNIFN RDMGGEDVKV
201: PIELSFMEAV QGCSKTITFQ TDLPCTACGG SGVPPGTKPE TCRRCKGSGV SISQTGPFTL QTTCPSCKGT GKIVSSFCKS CKGNRVLRGP KTVKVDIMPG
301: VDTDETLKVY GSGGADPEGN RPGDLYVVLK VREDPVFRRE GSDIHVDAVL SITQAILGGT IQVPTLTGDV VVKVRSGTQP GQKVVLKKKG IKGRNSYSFG
401: DQFVHFNVSI PTNLTPRQRQ LIEEFAKEEQ GEYDKGAAAG ASR

Best Arabidopsis Sequence Match ( AT5G48030.1 )
(BLAST)

001: MVPSNGAKVL RLLSRRCLSS SLIQDLANQK LRGVCIGSYR RLNTSVGNHA NVIGDYASKS GHDRKWINFG GFNTNFGSTR SFHGTGSSFM SAKDYYSVLG
101: VSKNAQEGEI KKAYYGLAKK LHPDMNKDDP EAETKFQEVS KAYEILKDKE KRDLYDQVGH EAFEQNASGG FPNDQGFGGG GGGGFNPFDI FGSFNGDIFN
201: MYRQDIGGQD VKVLLDLSFM EAVQGCSKTV TFQTEMACNT CGGQGVPPGT KREKCKACNG SGMTSLRRGM LSIQTTCQKC GGAGQTFSSI CKSCRGARVV
301: RGQKSVKVTI DPGVDNSDTL KVARVGGADP EGDQPGDLYV TLKVREDPVF RREGSDIHVD AVLSVTQAIL GGTIQVPTLT GDVVVKVRPG TQPGHKVVLR
401: NKGIRARKST KFGDQYVHFN VSIPANITQR QRELLEEFSK AEQGEYEQRT ATGSSQ

Arabidopsis Description

GFA2GFA2 [Source:UniProtKB/TrEMBL;Acc:A0A178UJR3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.