Factsheet for Solyc01g081330.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	46.54	58.21
KRH16800	Soybean	mitochondrion	55.53	51.39
KRH72418	Soybean	mitochondrion	55.07	50.96
AT1G28210.2	Thale cress	mitochondrion	48.39	49.18
CDX90134	Canola	mitochondrion	47.7	48.14
Bra010892.1-P	Field mustard	mitochondrion	47.47	47.91
GSMUA_Achr6P02160_001	Banana	mitochondrion	50.23	46.09
KXG19604	Sorghum	mitochondrion	45.16	42.15
TraesCS7B01G081600.2	Wheat	mitochondrion	45.85	41.37
TraesCS7D01G177900.1	Wheat	mitochondrion	45.62	41.34
CDY35719	Canola	mitochondrion	46.77	40.85
TraesCS7A01G176600.1	Wheat	mitochondrion	44.7	40.76
Solyc01g086740.2.1	Tomato	mitochondrion	32.49	31.83
Zm00001d044878_P002	Maize	mitochondrion	35.48	31.43
Solyc01g105340.2.1	Tomato	plastid	24.88	30.59
Solyc03g116790.2.1	Tomato	plastid	28.57	24.9
Solyc09g005350.2.1	Tomato	nucleus, plastid	19.12	24.41
Solyc05g006820.2.1	Tomato	plastid	17.28	24.12
Solyc02g077670.2.1	Tomato	cytosol	18.89	23.91
Solyc11g071830.1.1	Tomato	plastid	22.12	22.97
Solyc04g009770.2.1	Tomato	nucleus	21.66	22.49
Solyc06g071110.2.1	Tomato	nucleus	17.28	22.26
Solyc04g005820.2.1	Tomato	cytosol, nucleus	16.36	22.19
Solyc05g055160.2.1	Tomato	nucleus	20.97	21.72
Solyc03g118500.2.1	Tomato	plastid	26.5	21.62
Solyc11g006460.1.1	Tomato	nucleus	20.74	21.48
Solyc07g053620.2.1	Tomato	nucleus	11.06	21.43
Solyc01g079610.2.1	Tomato	nucleus	16.82	21.16
Solyc01g090550.2.1	Tomato	nucleus	19.82	20.28
Solyc05g050810.2.1	Tomato	nucleus	11.52	19.46
Solyc11g044450.1.1	Tomato	nucleus	14.52	18.31
Solyc10g084300.1.1	Tomato	nucleus	10.14	16.67
Solyc03g007650.1.1	Tomato	cytosol, mitochondrion, nucleus	10.14	16.12
Solyc05g050820.2.1	Tomato	cytosol	8.76	15.97
Solyc06g060240.1.1	Tomato	cytosol	9.91	11.2

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.3.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628
GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom
InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K4AY25
HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF27	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	EnsemblPlantsGene:Solyc01g081330.2	EnsemblPlants:Solyc01g081330.2.1	UniParc:UPI0002762987	:

Description

Chaperone protein dnaJ 1, mitochondrial [Source:Projected from Arabidopsis thaliana (AT1G28210) UniProtKB/Swiss-Prot;Acc:Q38813]

Coordinates

chr1:-:80552137..80568735

Molecular Weight (calculated)

48485.6 Da

IEP (calculated)

8.977

GRAVY (calculated)

-0.470

Length

434 amino acids

Sequence
(BLAST)

001: MINKGNVCTH VSEYLPTLLK NRSLYSCSFI GKPNSSSTRR FPPLKHFFHS TGACYSAERD YYEILGVSRD STRDEIKKAF HVLAKKYHPD ANKNNPSAKR
101: KFQEIRDAYE ILQNPQKRAQ YDMMKEQPSN NTENINYNHR NGNDFRYTYS TQFSGSFQKI FSEIFENEAE NLTQDIQVEL SLSFSEAAKG CTKHLSFDAD
201: VPCDSCSGLG YPLNSTPKVC PTCQGVGRVT IPPFTATCST CKGSGRVIKE RCRACKASGV VEAIKDVKVT IPAGVDSGDT IRVPKAGHAG RRGVQPGSLF
301: IKLKVAKDPL FAREGADLYV DYHISFTKAI LGGKVEVPTL SGKTNIQVPK GVQPGQLVVL RGKGLPKSGF LVNHGDQYVR FRIDFPTNID NYDNWEKVSN
401: ILTHLYTHCS VILFTYLYKN SRIEDDGCHL DVTL

Best Arabidopsis Sequence Match ( AT1G28210.2 )
(BLAST)

001: MRRFNWVLRH VQARRTFDSA IGLRQGSQKP LFERYIHATG INNSSARNYY DVLGVSPKAT REEIKKSFHE LAKKFHPDTN RNNPSAKRKF QEIREAYETL
101: GNSERREEYD KLQYRNSDYV NNDGGDSERF RRAYQSNFSD TFHKIFSEIF ENNQIKPDIR VELSLSLSEA AEGCTKRLSF DAYVFCDSCD GLGHPSDAAM
201: SICPTCRGVG RVTIPPFTAS CQTCKGTGHI IKEYCMSCRG SGIVEGTKTA ELVIPGGVES EATITIVGAG NVSSRTSQPG NLYIKLKVAN DSTFTRDGSD
301: IYVDANISFT QAILGGKVVV PTLSGKIQLD IPKGTQPDQL LVLRGKGLPK QGFFVDHGDQ YVRFRVNFPT EVNERQRAIL EEFAKEEINN ELSDSAEGSW
401: WNLTGPQIIR DFSLMVLLAL LLSRLMG

Arabidopsis Description

ATJ1DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4HWI4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.