Factsheet for Solyc11g044450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062759	Potato	cytosol	94.77	93.95
Os05t0427900-01	Rice	cytosol	20.93	45.57
VIT_12s0034g02190.t01	Wine grape	nucleus	41.86	41.98
EES01846	Sorghum	cytosol	39.53	41.34
Os01t0875700-01	Rice	cytosol	39.24	41.28
GSMUA_Achr7P03030_001	Banana	cytosol	37.79	40.88
Zm00001d012242_P001	Maize	cytosol	37.21	40.51
KRH10414	Soybean	cytosol	44.77	40.42
HORVU3Hr1G081940.1	Barley	cytosol	37.79	40.12
KRH44054	Soybean	cytosol	44.48	39.84
TraesCS3A01G386400.1	Wheat	cytosol	36.63	39.38
TraesCS3D01G379400.1	Wheat	cytosol	36.63	38.77
TraesCS3B01G418500.1	Wheat	cytosol	36.34	38.46
TraesCS1A01G267600.1	Wheat	cytosol	36.34	38.23
TraesCS1B01G278300.1	Wheat	cytosol	36.05	37.92
Solyc06g060240.1.1	Tomato	cytosol	42.15	37.76
TraesCS1D01G267500.1	Wheat	cytosol	36.05	37.46
GSMUA_Achr8P32540_001	Banana	mitochondrion	28.78	35.61
Zm00001d038250_P001	Maize	cytosol	34.3	35.22
Solyc05g006820.2.1	Tomato	plastid	31.69	35.05
Solyc09g005350.2.1	Tomato	nucleus, plastid	34.3	34.71
Solyc04g005820.2.1	Tomato	cytosol, nucleus	32.27	34.69
EES19566	Sorghum	cytosol	34.01	34.41
Zm00001d042653_P001	Maize	plastid	39.53	34.0
Solyc02g077670.2.1	Tomato	cytosol	32.85	32.94
Solyc06g071110.2.1	Tomato	nucleus	31.1	31.75
KRG90292	Soybean	cytosol, nucleus, plastid	25.87	31.12
Solyc10g084300.1.1	Tomato	nucleus	23.26	30.3
Solyc03g007650.1.1	Tomato	cytosol, mitochondrion, nucleus	22.67	28.57
TraesCS6A01G421300.1	Wheat	cytosol	16.57	27.01
HORVU7Hr1G073040.2	Barley	cytosol	16.28	24.14
HORVU0Hr1G000620.4	Barley	plastid	27.33	23.8
Solyc07g053620.2.1	Tomato	nucleus	15.41	23.66
Solyc01g079610.2.1	Tomato	nucleus	23.26	23.19
Solyc05g055160.2.1	Tomato	nucleus	25.87	21.24
Solyc11g006460.1.1	Tomato	nucleus	25.29	20.76
Solyc04g009770.2.1	Tomato	nucleus	24.71	20.33
Solyc11g071830.1.1	Tomato	plastid	24.42	20.1
Solyc01g090550.2.1	Tomato	nucleus	22.67	18.4
Solyc05g050820.2.1	Tomato	cytosol	11.63	16.81
Solyc01g105340.2.1	Tomato	plastid	15.99	15.58
Solyc01g081330.2.1	Tomato	plastid	18.31	14.52
Solyc01g086740.2.1	Tomato	mitochondrion	18.31	14.22
Solyc03g116790.2.1	Tomato	plastid	19.48	13.45
Solyc05g050810.2.1	Tomato	nucleus	9.59	12.84
Solyc03g118500.2.1	Tomato	plastid	18.6	12.03

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K4D8B3	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:Solyc11g044450.1	EnsemblPlants:Solyc11g044450.1.1	UniParc:UPI000276A44A	SEG:seg

Description

No Description!

Coordinates

chr11:-:32722177..32723529

Molecular Weight (calculated)

38414.0 Da

IEP (calculated)

8.104

GRAVY (calculated)

-0.522

Length

344 amino acids

Sequence
(BLAST)

001: MGESTKSPSS ASKYYGILEI PKSASLKDIC KAYKHLVKKW HPDRNKSNQA EAVDKFRSIN EAYRVLSKKK REEADLFKSD TAKTPKKSSK DEEDELQISS
101: PTLLSRTTSR ISPTVDFYTS MPACFTMSGT NTPTTPVSDQ PPNNLSKVAS KPIIFSQSTS RRKTQPIEKK LECTLEELCN GCVKKVIITR DVVATTGLIV
201: KEEEVVTIMV KPGWKRGTKI TFEGKGDERT GDIIFSIDEK THPLYKREGD DLLLGVEVPL VQALTGCTIT IPLLGRDEAM TMSFDDEIIY PGFEKVIPGQ
301: GMPKSKQEST NRGNLVLQFL IQFPLELSEE QRSEVVSILE NHNS

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.