Factsheet for PGSC0003DMT400062759

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g044450.1.1	Tomato	nucleus	93.95	94.77
Os05t0427900-01	Rice	cytosol	20.46	44.94
VIT_12s0034g02190.t01	Wine grape	nucleus	41.79	42.27
Os01t0875700-01	Rice	cytosol	39.48	41.9
EES01846	Sorghum	cytosol	39.48	41.64
GSMUA_Achr7P03030_001	Banana	cytosol	38.04	41.51
Zm00001d012242_P001	Maize	cytosol	36.89	40.51
KRH10414	Soybean	cytosol	44.09	40.16
HORVU3Hr1G081940.1	Barley	cytosol	37.46	40.12
TraesCS3A01G386400.1	Wheat	cytosol	36.31	39.38
KRH44054	Soybean	cytosol	43.52	39.32
TraesCS3D01G379400.1	Wheat	cytosol	36.31	38.77
TraesCS3B01G418500.1	Wheat	cytosol	36.02	38.46
TraesCS1A01G267600.1	Wheat	cytosol	35.73	37.92
TraesCS1B01G278300.1	Wheat	cytosol	35.45	37.61
TraesCS1D01G267500.1	Wheat	cytosol	35.45	37.16
PGSC0003DMT400045398	Potato	mitochondrion	32.28	36.01
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	39.77	35.84
GSMUA_Achr8P32540_001	Banana	mitochondrion	28.53	35.61
PGSC0003DMT400007444	Potato	cytosol	31.7	35.48
Zm00001d038250_P001	Maize	cytosol	33.72	34.93
PGSC0003DMT400081223	Potato	cytosol	34.29	34.9
PGSC0003DMT400059397	Potato	cytosol	34.01	34.71
PGSC0003DMT400083824	Potato	cytosol	32.28	34.57
EES19566	Sorghum	cytosol	33.43	34.12
Zm00001d042653_P001	Maize	plastid	38.9	33.75
PGSC0003DMT400083040	Potato	cytosol	31.12	32.05
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	31.41	31.87
KRG90292	Soybean	cytosol, nucleus, plastid	25.07	30.42
TraesCS6A01G421300.1	Wheat	cytosol	16.43	27.01
HORVU7Hr1G073040.2	Barley	cytosol	16.43	24.57
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	23.63	23.77
HORVU0Hr1G000620.4	Barley	plastid	26.51	23.29
PGSC0003DMT400060145	Potato	cytosol	25.65	21.24
PGSC0003DMT400005019	Potato	cytosol	25.07	20.76
PGSC0003DMT400065401	Potato	nucleus	24.78	20.53
PGSC0003DMT400007728	Potato	nucleus	23.92	19.81
PGSC0003DMT400066980	Potato	nucleus	23.05	19.05
PGSC0003DMT400018083	Potato	nucleus	22.19	18.38
PGSC0003DMT400064990	Potato	mitochondrion	18.44	14.45
PGSC0003DMT400032760	Potato	plastid	17.87	13.93
PGSC0003DMT400036786	Potato	plastid	18.44	12.03

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102595235	Gene3D:2.60.260.20	MapMan:35.1	InterPro:DnaJ_C	InterPro:DnaJ_domain
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M1C9I2
PFAM:PF00226	PFAM:PF01556	EnsemblPlantsGene:PGSC0003DMG400024427	PGSC:PGSC0003DMG400024427	EnsemblPlants:PGSC0003DMT400062759	PRINTS:PR00625
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF522	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
UniParc:UPI0002957F7C	RefSeq:XP_006352130.1	SEG:seg	:	:	:

Description

Heat shock protein binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400024427]

Coordinates

chr11:+:30495090..30496842

Molecular Weight (calculated)

38596.2 Da

IEP (calculated)

7.013

GRAVY (calculated)

-0.505

Length

347 amino acids

Sequence
(BLAST)

001: MGESTKSPSS ASKYYGILEI PKSASLKDIC KAYKHLVKKW HPDRNKSNQA EAVDKFRSIN EAYRVLSKKK REEADLFKSD AAKTPKKNSR DEEEDELQIS
101: SPTLLSRTTS RISPTVDFYT SMPACFTMSG TNTPTTPGTP VSDQPPNYLS KVASKPIIFS QSTSRRKPQP IEKKLECTLE ELCNGCVKKV IITRDVVATT
201: GLIVKEEEVV TIMVKPGWKR GTKITFEGKG DERAGDIIFS IDEKTHPLYK REGDDLLLGV EVPLVQALTG CTITVPLLAG DEVMTMSFDD EIIHPGFEKI
301: IPGQGMPKPK QESTNRGDLV LQFLIQFPLE LSEEQKSEAV SILENHS

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.