Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0427900-01 | Rice | cytosol | 20.41 | 44.3 |
| KRH10414 | Soybean | cytosol | 48.4 | 43.57 |
| KRH44054 | Soybean | cytosol | 47.52 | 42.45 |
| Solyc11g044450.1.1 | Tomato | nucleus | 41.98 | 41.86 |
| PGSC0003DMT400062759 | Potato | cytosol | 42.27 | 41.79 |
| KRG90292 | Soybean | cytosol, nucleus, plastid | 31.2 | 37.41 |
| GSMUA_Achr7P03030_001 | Banana | cytosol | 34.4 | 37.11 |
| GSMUA_Achr8P32540_001 | Banana | mitochondrion | 28.28 | 34.89 |
| Os01t0875700-01 | Rice | cytosol | 32.07 | 33.64 |
| Zm00001d012242_P001 | Maize | cytosol | 30.9 | 33.54 |
| TraesCS3A01G386400.1 | Wheat | cytosol | 31.2 | 33.44 |
| EES01846 | Sorghum | cytosol | 32.07 | 33.43 |
| HORVU3Hr1G081940.1 | Barley | cytosol | 31.49 | 33.33 |
| TraesCS3D01G379400.1 | Wheat | cytosol | 31.49 | 33.23 |
| TraesCS1B01G278300.1 | Wheat | cytosol | 31.49 | 33.03 |
| TraesCS1D01G267500.1 | Wheat | cytosol | 31.78 | 32.93 |
| TraesCS3B01G418500.1 | Wheat | cytosol | 30.9 | 32.62 |
| TraesCS1A01G267600.1 | Wheat | cytosol | 30.9 | 32.42 |
| Zm00001d038250_P001 | Maize | cytosol | 29.45 | 30.15 |
| EES19566 | Sorghum | cytosol | 29.74 | 30.0 |
| VIT_01s0026g01450.t01 | Wine grape | cytosol | 22.16 | 27.84 |
| VIT_17s0000g05530.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 28.28 | 27.79 |
| Zm00001d042653_P001 | Maize | plastid | 32.07 | 27.5 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 27.11 | 27.43 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 26.82 | 27.22 |
| VIT_10s0003g00260.t01 | Wine grape | cytosol | 26.82 | 26.9 |
| HORVU0Hr1G000620.4 | Barley | plastid | 25.95 | 22.53 |
| VIT_06s0080g01230.t01 | Wine grape | cytosol | 19.83 | 16.31 |
| TraesCS6A01G421300.1 | Wheat | cytosol | 9.91 | 16.11 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 15.74 | 15.65 |
| VIT_13s0073g00560.t01 | Wine grape | cytosol | 18.37 | 15.14 |
| HORVU7Hr1G073040.2 | Barley | cytosol | 9.62 | 14.22 |
| VIT_15s0021g02090.t01 | Wine grape | cytosol | 17.78 | 13.77 |
| VIT_18s0001g06970.t01 | Wine grape | endoplasmic reticulum, extracellular | 12.24 | 12.1 |
| VIT_17s0000g02030.t01 | Wine grape | plastid | 14.58 | 10.39 |
| VIT_09s0002g07210.t01 | Wine grape | plastid | 14.29 | 10.02 |
| VIT_13s0064g01360.t01 | Wine grape | mitochondrion | 12.83 | 9.76 |
| VIT_00s0324g00040.t01 | Wine grape | plastid | 12.83 | 9.15 |
Protein Annotations
| Gene3D:2.60.260.20 | MapMan:35.1 | ProteinID:CCB48676 | ProteinID:CCB48676.1 | InterPro:DnaJ_C | UniProt:F6H935 |
| EMBL:FN595497 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | PFAM:PF01556 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF522 |
| SUPFAM:SSF49493 | UniParc:UPI000210959D | ArrayExpress:VIT_12s0034g02190 | EnsemblPlantsGene:VIT_12s0034g02190 | EnsemblPlants:VIT_12s0034g02190.t01 | SEG:seg |
Description
No Description!
Coordinates
chr12:-:18523523..18525911
Molecular Weight (calculated)
37717.8 Da
IEP (calculated)
10.325
GRAVY (calculated)
-0.572
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MGADDSTTPK GSYFHLSMDD GFFQLPSFLS KSSSRRSHTP PRAQTPTRFG VSLSKSASRR NSIPTDFPIS PSTTTPNWTS SSPADFPSSP LGGTPNRRSS
101: TPTSLSKSAG RQSTNPNSLS KSASRRSNSA GTSTDFAASL SKSTSRRSTT PIIYSQSTVR RKPQPIEKKL ECTLEELCHG CNKKIKITRD VISDIGLIVQ
201: EEEILRIQIK PGWRQGTKVK FDGRGDERPG TLPADIIFLI DEKRHPIFKR VGDNLEIGVE IPLVKAITGC PLSVPLLGGE KMSLFIDDII YHGYEKIIPG
301: QGMPMAKQEG RRGDLKIKFL VSFPTELSDQ QRSDVYRILQ DSS
101: TPTSLSKSAG RQSTNPNSLS KSASRRSNSA GTSTDFAASL SKSTSRRSTT PIIYSQSTVR RKPQPIEKKL ECTLEELCHG CNKKIKITRD VISDIGLIVQ
201: EEEILRIQIK PGWRQGTKVK FDGRGDERPG TLPADIIFLI DEKRHPIFKR VGDNLEIGVE IPLVKAITGC PLSVPLLGGE KMSLFIDDII YHGYEKIIPG
301: QGMPMAKQEG RRGDLKIKFL VSFPTELSDQ QRSDVYRILQ DSS
001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA
Arabidopsis Description
DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.