Factsheet for VIT_09s0002g07210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09715	Soybean	nucleus, plastid	73.62	73.02
Solyc03g116790.2.1	Tomato	plastid	74.03	72.69
Bra035201.1-P	Field mustard	plastid	73.21	71.46
CDX87288	Canola	plastid	73.21	71.46
CDY58774	Canola	plastid	72.6	71.0
GSMUA_Achr11P...	Banana	plastid	70.14	70.0
AT1G80030.2	Thale cress	plastid	71.37	69.8
KRH44477	Soybean	plastid	62.99	69.37
KRH23590	Soybean	nucleus	49.49	67.79
Os02t0804500-01	Rice	plastid	65.44	65.71
TraesCS6D01G356800.1	Wheat	plastid	65.24	65.64
TraesCS6A01G372700.1	Wheat	plastid	65.03	65.16
TraesCS6B01G410600.1	Wheat	plastid	65.44	64.91
KXG31305	Sorghum	plastid	65.85	64.79
HORVU0Hr1G017450.8	Barley	cytosol	60.74	61.36
Zm00001d018413_P003	Maize	mitochondrion	65.03	55.89
Zm00001d052001_P002	Maize	plastid	65.24	51.95
VIT_00s0324g00040.t01	Wine grape	plastid	44.79	45.53
VIT_17s0000g02030.t01	Wine grape	plastid	40.49	41.16
VIT_10s0003g00260.t01	Wine grape	cytosol	21.47	30.7
VIT_04s0008g04300.t01	Wine grape	cytosol	21.27	30.68
VIT_01s0026g01450.t01	Wine grape	cytosol	16.97	30.4
VIT_08s0105g00350.t01	Wine grape	cytosol	20.86	30.18
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	21.27	29.97
VIT_13s0064g01360.t01	Wine grape	mitochondrion	26.99	29.27
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	20.04	28.41
VIT_06s0080g01230.t01	Wine grape	cytosol	24.13	28.3
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	20.04	28.08
VIT_13s0073g00560.t01	Wine grape	cytosol	23.11	27.16
VIT_15s0021g02090.t01	Wine grape	cytosol	24.54	27.09
VIT_12s0034g02190.t01	Wine grape	nucleus	10.02	14.29

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100268143	wikigene:100268143	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20
ProteinID:CBI36347	ProteinID:CBI36347.3	UniProt:D7U151	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain
InterPro:DnaJ_domain_CS	EMBL:FN596494	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EntrezGene:LOC100268143	wikigene:LOC100268143	HAMAP:MF_01152
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
SUPFAM:SSF57938	TIGR:TC56096	TIGRFAMs:TIGR02349	UniParc:UPI0001BE4B1C	ArrayExpress:VIT_09s0002g07210	EnsemblPlantsGene:VIT_09s0002g07210
EnsemblPlants:VIT_09s0002g07210.t01	unigene:Vvi.11030	RefSeq:XP_002265060	RefSeq:XP_002265060.2	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:7150525..7184468

Molecular Weight (calculated)

52722.5 Da

IEP (calculated)

9.027

GRAVY (calculated)

-0.361

Length

489 amino acids

Sequence
(BLAST)

001: MAITSLSSLS FNPDRPLLLF SSSNGPSSSS SSFFTGGTHF RTQKSLACVY LPSSSLSSKR VSVVVAASSD YYSTLGVPKS ANSKEIKAAY RKLARQYHPD
101: VNKQPGATEK FKEISAAYEV LSDDKKRALY DQFGEAGVKS GVGGQAGAYT TNPFDLFETF FGPSMGGFSG MDQAGFRTRR RTTVSKGEDI RYDMTLKFSE
201: AIFGAEKEFE LSHLETCEVC TGTGAKIGSK MRICSTCGGR GQVMRTEQTP FGLFSQVSVC PTCGGDGEVI SEYCRKCSGE GRIRVKKDIK VKVPPGVSKG
301: SILRVAGEGD AGLRGGPPGD LFVYLDVEEI PEIQRDGINL CSTVTVSYLD AILGAVVKVK TVEGVTELQI PSGTQPGDVL VLAKKGAPKL NRPTIRGDHL
401: FTVKVTIPNR ISAKERELLE ELAFLSNNTS SRSRTRPKAQ PATKSRESQK DAVTEKTEDA GDDNDVWKKL KDFAGSVASG ALNWLKDNF

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.