Factsheet for AT1G80030.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58774	Canola	plastid	86.0	86.0
CDX87288	Canola	plastid	85.4	85.23
Bra035201.1-P	Field mustard	plastid	85.4	85.23
VIT_09s0002g07210.t01	Wine grape	plastid	69.8	71.37
KRH09715	Soybean	nucleus, plastid	69.4	70.39
Solyc03g116790.2.1	Tomato	plastid	68.0	68.27
KRH23590	Soybean	nucleus	47.8	66.95
KRH44477	Soybean	plastid	57.8	65.09
GSMUA_Achr11P...	Banana	plastid	63.6	64.9
Os02t0804500-01	Rice	plastid	62.6	64.27
TraesCS6D01G356800.1	Wheat	plastid	62.4	64.2
TraesCS6A01G372700.1	Wheat	plastid	62.4	63.93
TraesCS6B01G410600.1	Wheat	plastid	62.4	63.29
KXG31305	Sorghum	plastid	62.2	62.58
HORVU0Hr1G017450.8	Barley	cytosol	58.4	60.33
Zm00001d018413_P003	Maize	mitochondrion	61.4	53.95
Zm00001d052001_P002	Maize	plastid	60.6	49.35
AT2G22360.1	Thale cress	plastid	40.4	45.7
AT4G39960.1	Thale cress	mitochondrion, plastid	40.8	45.64
AT3G17830.1	Thale cress	plastid	38.2	36.94
AT5G48030.1	Thale cress	mitochondrion	28.0	30.7
AT1G59725.1	Thale cress	cytoskeleton, cytosol, nucleus	19.8	29.91
AT2G20560.1	Thale cress	cytosol	20.0	29.67
AT1G10350.1	Thale cress	cytosol	20.2	28.94
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	20.0	28.9
AT1G28210.2	Thale cress	mitochondrion	24.6	28.81
AT3G08910.1	Thale cress	nucleus	18.6	28.79
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	19.8	28.45
AT5G01390.1	Thale cress	cytosol	19.0	28.36
AT3G47940.1	Thale cress	cytosol	19.6	28.0
AT5G25530.1	Thale cress	cytosol	18.8	27.09
AT3G44110.1	Thale cress	nucleus	21.6	25.71
AT5G22060.1	Thale cress	cytosol	21.2	25.3
AT2G20550.2	Thale cress	cytosol	11.4	20.07
AT1G44160.1	Thale cress	mitochondrion	10.6	14.85
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	11.4	13.01

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:844343	ProteinID:AEE36345.1
ProteinID:AEE36346.1	ProteinID:AEE36347.1	EMBL:AK229599	ProteinID:ANM59363.1	ArrayExpress:AT1G80030	EnsemblPlantsGene:AT1G80030
RefSeq:AT1G80030	TAIR:AT1G80030	RefSeq:AT1G80030-TAIR-G	EnsemblPlants:AT1G80030.2	TAIR:AT1G80030.2	Unigene:At.23752
ncoils:Coil	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009941
GO:GO:0009987	GO:GO:0016020	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
HAMAP:MF_01152	RefSeq:NP_001321726.1	RefSeq:NP_565227.1	RefSeq:NP_849910.1	RefSeq:NP_849911.1	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001016	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	UniProt:Q0WN54	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI000016331B	SEG:seg	:

Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]

Coordinates

chr1:-:30104830..30109087

Molecular Weight (calculated)

53823.2 Da

IEP (calculated)

7.647

GRAVY (calculated)

-0.470

Length

500 amino acids

Sequence
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.