Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63891 | Canola | cytosol | 94.63 | 87.04 |
| AT2G22360.1 | Thale cress | plastid | 83.89 | 84.84 |
| CDX69371 | Canola | mitochondrion | 95.08 | 84.83 |
| Bra011820.1-P | Field mustard | cytosol | 95.08 | 80.34 |
| Solyc01g105340.2.1 | Tomato | plastid | 61.3 | 77.62 |
| KRH59311 | Soybean | plastid | 71.81 | 74.13 |
| KRH31310 | Soybean | nucleus, plastid | 72.26 | 73.41 |
| KRH43163 | Soybean | plastid | 71.36 | 73.0 |
| KRG97564 | Soybean | plastid | 70.92 | 72.05 |
| VIT_00s0324g00040.t01 | Wine grape | plastid | 76.29 | 70.89 |
| PGSC0003DMT400032760 | Potato | plastid | 70.25 | 70.56 |
| TraesCS5A01G115000.1 | Wheat | plastid | 65.1 | 70.12 |
| EES13204 | Sorghum | plastid | 68.46 | 68.3 |
| GSMUA_Achr1P15780_001 | Banana | plastid | 67.79 | 68.09 |
| Os05t0333500-01 | Rice | mitochondrion, plastid | 68.01 | 68.01 |
| Os05t0334000-01 | Rice | mitochondrion, plastid | 68.01 | 68.01 |
| Os05t0334400-01 | Rice | mitochondrion, plastid | 68.01 | 68.01 |
| GSMUA_Achr3P00920_001 | Banana | mitochondrion | 68.46 | 67.7 |
| Zm00001d047195_P001 | Maize | mitochondrion | 45.86 | 62.12 |
| Zm00001d024635_P001 | Maize | mitochondrion | 68.46 | 62.07 |
| Zm00001d049583_P003 | Maize | cytosol, mitochondrion, nucleus, plastid | 68.01 | 61.41 |
| TraesCS5B01G115900.1 | Wheat | plastid | 65.55 | 60.66 |
| GSMUA_Achr4P20410_001 | Banana | cytosol | 69.13 | 58.86 |
| TraesCS5D01G125500.1 | Wheat | nucleus | 65.77 | 54.65 |
| HORVU5Hr1G037600.2 | Barley | cytosol, nucleus | 66.0 | 50.6 |
| AT1G80030.2 | Thale cress | plastid | 45.64 | 40.8 |
| AT3G17830.1 | Thale cress | plastid | 40.04 | 34.62 |
| AT5G48030.1 | Thale cress | mitochondrion | 33.33 | 32.68 |
| AT2G20560.1 | Thale cress | cytosol | 22.6 | 29.97 |
| AT3G08910.1 | Thale cress | nucleus | 21.25 | 29.41 |
| AT5G01390.1 | Thale cress | cytosol | 21.7 | 28.96 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 22.37 | 28.74 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 20.58 | 27.79 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 21.03 | 27.17 |
| AT1G28210.2 | Thale cress | mitochondrion | 25.95 | 27.17 |
| AT5G25530.1 | Thale cress | cytosol | 20.81 | 26.8 |
| AT1G10350.1 | Thale cress | cytosol | 20.58 | 26.36 |
| AT3G47940.1 | Thale cress | cytosol | 19.91 | 25.43 |
| AT3G44110.1 | Thale cress | nucleus | 23.49 | 25.0 |
| AT5G22060.1 | Thale cress | cytosol | 23.27 | 24.82 |
| AT2G20550.2 | Thale cress | cytosol | 12.53 | 19.72 |
| AT1G44160.1 | Thale cress | mitochondrion | 13.2 | 16.53 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 12.08 | 12.33 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.4.2 | Gene3D:2.10.230.10 | Gene3D:2.60.260.20 | EntrezGene:830157 | ProteinID:AEE87146.1 |
| ProteinID:ANM67816.1 | ArrayExpress:AT4G39960 | EnsemblPlantsGene:AT4G39960 | RefSeq:AT4G39960 | TAIR:AT4G39960 | RefSeq:AT4G39960-TAIR-G |
| EnsemblPlants:AT4G39960.1 | TAIR:AT4G39960.1 | EMBL:AY052658 | EMBL:AY063727 | InterPro:DnaJ | InterPro:DnaJ_C |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006457 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0031072 |
| GO:GO:0046872 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:HSP_DnaJ_Cys-rich_dom | InterPro:HSP_DnaJ_Cys-rich_dom_sf | InterPro:IPR001305 |
| InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | HAMAP:MF_01152 | RefSeq:NP_001329618.1 | RefSeq:NP_568076.1 |
| PFAM:PF00226 | PFAM:PF00684 | PFAM:PF01556 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 |
| PFscan:PS51188 | PANTHER:PTHR43096 | UniProt:Q940V1 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 |
| SUPFAM:SSF57938 | TIGRFAMs:TIGR02349 | UniParc:UPI000009E3A3 | SEG:seg | : | : |
Description
AT4g39960/T5J17_130 [Source:UniProtKB/TrEMBL;Acc:Q940V1]
Coordinates
chr4:+:18533734..18536618
Molecular Weight (calculated)
48034.6 Da
IEP (calculated)
9.420
GRAVY (calculated)
-0.362
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MALIQFGSSC VAQWGILRPR FAVKAFYPSR LESHQDNCIS QINCLGASRS SMFAQGSLPF LSLTGVSPNT HSRRGARFTV RADTDFYSVL GVSKNATKAE
101: IKSAYRKLAR SYHPDVNKDA GAEDKFKEIS NAYEILSDDE KRSLYDRYGE AGVKGAGMGG MGDYSNPFDL FESLFEGMGG MGGMGGGMGS RGSRSRAIDG
201: EDEYYSLILN FKEAVFGIEK EIEISRLESC GTCNGSGAKA GTKPTKCKTC GGQGQVVAST RTPLGVFQQV MTCSPCNGTG EISKPCGACS GDGRVRRTKR
301: ISLKVPAGVD SGSRLRVRGE GNAGKRGGSP GDLFAVIEVI PDPVLKRDDT NILYTCKISY VDAILGTTLK VPTVDGEVDL KVPAGTQPST TLVMAKKGVP
401: VLNKSKMRGD QLVRVQVEIP KRLSKEEKML VEELADMSKN KVANSRR
101: IKSAYRKLAR SYHPDVNKDA GAEDKFKEIS NAYEILSDDE KRSLYDRYGE AGVKGAGMGG MGDYSNPFDL FESLFEGMGG MGGMGGGMGS RGSRSRAIDG
201: EDEYYSLILN FKEAVFGIEK EIEISRLESC GTCNGSGAKA GTKPTKCKTC GGQGQVVAST RTPLGVFQQV MTCSPCNGTG EISKPCGACS GDGRVRRTKR
301: ISLKVPAGVD SGSRLRVRGE GNAGKRGGSP GDLFAVIEVI PDPVLKRDDT NILYTCKISY VDAILGTTLK VPTVDGEVDL KVPAGTQPST TLVMAKKGVP
401: VLNKSKMRGD QLVRVQVEIP KRLSKEEKML VEELADMSKN KVANSRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.