CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43163	Soybean	plastid	97.23	96.34
KRH31310	Soybean	nucleus, plastid	84.06	82.73
KRG97564	Soybean	plastid	82.68	81.36
Solyc01g105340.2.1	Tomato	plastid	64.9	79.6
AT2G22360.1	Thale cress	plastid	75.75	74.21
Bra030245.1-P	Field mustard	plastid	76.67	73.45
CDX89453	Canola	plastid	76.67	73.45
CDY25588	Canola	plastid	76.91	73.35
PGSC0003DMT400032760	Potato	plastid	74.36	72.36
AT4G39960.1	Thale cress	mitochondrion, plastid	74.13	71.81
TraesCS5A01G115000.1	Wheat	plastid	68.82	71.81
Os05t0334400-01	Rice	mitochondrion, plastid	72.75	70.47
Os05t0334000-01	Rice	mitochondrion, plastid	72.75	70.47
Os05t0333500-01	Rice	mitochondrion, plastid	72.75	70.47
VIT_00s0324g00040.t01	Wine grape	plastid	78.06	70.27
GSMUA_Achr1P15780_001	Banana	plastid	71.13	69.21
EES13204	Sorghum	plastid	71.13	68.75
GSMUA_Achr3P00920_001	Banana	mitochondrion	71.59	68.58
CDY63891	Canola	cytosol	73.67	65.64
CDX69371	Canola	mitochondrion	74.36	64.27
Zm00001d024635_P001	Maize	mitochondrion	71.59	62.88
TraesCS5B01G115900.1	Wheat	plastid	69.52	62.32
Zm00001d047195_P001	Maize	mitochondrion	46.65	61.21
GSMUA_Achr4P20410_001	Banana	cytosol	74.13	61.14
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	69.52	60.81
Bra011820.1-P	Field mustard	cytosol	73.9	60.49
TraesCS5D01G125500.1	Wheat	nucleus	69.75	56.13
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	69.28	51.46
KRH09715	Soybean	nucleus, plastid	46.88	41.18
KRH44477	Soybean	plastid	40.42	39.41
KRH23590	Soybean	nucleus	31.87	38.66
KRH61858	Soybean	cytosol	12.01	36.62
KRH13903	Soybean	mitochondrion	37.41	36.49
KRH43470	Soybean	mitochondrion	37.18	36.26
KRH36456	Soybean	mitochondrion	35.33	34.54
KRH27511	Soybean	mitochondrion	34.87	34.09
KRH48662	Soybean	nucleus, plastid	38.57	31.81
KRH61857	Soybean	cytosol, nucleus	8.08	30.17
KRH52529	Soybean	cytosol	22.63	30.06
KRH10937	Soybean	cytosol	23.33	29.79
KRH74747	Soybean	cytosol	18.94	29.6
KRH69388	Soybean	cytosol	18.71	29.35
KRH68242	Soybean	endoplasmic reticulum	23.09	29.15
KRH65726	Soybean	nucleus	22.63	29.08
KRG88624	Soybean	nucleus	22.63	29.08
KRH16800	Soybean	mitochondrion	31.18	28.78
KRH72418	Soybean	mitochondrion	31.18	28.78
KRH45833	Soybean	cytosol	19.17	28.72
KRG96505	Soybean	nucleus	22.63	28.57
KRG99186	Soybean	cytosol	18.94	28.37
KRH25647	Soybean	nucleus	22.86	28.37
KRH00241	Soybean	cytosol, nucleus	22.17	28.32
KRH75968	Soybean	nucleus	21.94	28.19
KRH21363	Soybean	cytosol	19.63	27.6
KRH55895	Soybean	endoplasmic reticulum, nucleus	22.4	27.56
KRH49388	Soybean	cytosol	21.94	27.46
KRH10940	Soybean	cytosol	21.02	27.08
KRH48754	Soybean	endoplasmic reticulum	26.1	26.9
KRH69236	Soybean	endoplasmic reticulum	21.48	26.88
KRH21362	Soybean	cytosol	21.02	26.76
KRH66593	Soybean	endoplasmic reticulum	25.87	26.67
KRH26709	Soybean	nucleus	25.64	26.62
KRH63417	Soybean	nucleus	12.47	26.6
KRH22611	Soybean	nucleus	25.4	26.38
KRG88903	Soybean	nucleus	25.17	26.14
KRH25334	Soybean	nucleus	24.94	25.9
KRH54495	Soybean	nucleus	20.55	25.36
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	15.24	25.1
KRH63415	Soybean	cytosol	7.62	22.45
KRH40259	Soybean	cytosol	8.08	22.01
KRH60063	Soybean	endoplasmic reticulum, golgi	9.7	21.21
KRH55068	Soybean	cytosol	5.31	16.79
KRH10414	Soybean	cytosol	12.24	13.91
KRH44054	Soybean	cytosol	12.01	13.54
KRH64663	Soybean	plastid	9.93	12.15
KRG90292	Soybean	cytosol, nucleus, plastid	6.7	10.14

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100792363	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EMBL:ACUP02003316
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EnsemblPlantsGene:GLYMA_05G177100	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:K7KQW8	EnsemblPlants:KRH59311	ProteinID:KRH59311	ProteinID:KRH59311.1
ProteinID:KRH59312.1	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI0002339E15	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:36577541..36583451

Molecular Weight (calculated)

46867.6 Da

IEP (calculated)

9.666

GRAVY (calculated)

-0.444

Length

433 amino acids

Sequence
(BLAST)

001: MAITPFGSTS SAQWGIHPQL LLRSSITGKF APSSHKVSFM TATSSSFFSR DSTLLNVGAP QTFNRRKGSR LIVRANADYY SVLGVSRNAS KSEIKSAYRK
101: LARNYHPDVN KEPGAEQKFK EISNAYEVLS DDEKRSIYDR FGEAGLKGSG MGMGDFSNPF DLFESLFEGM NRGAGSRGSW NGAIDGEDEY YSLVLNFKEA
201: VFGIEKEIEI SRLESCGTCN GSGAKPGTTP SRCSTCGGQG RVVSSTRTPL GIFQQSMTCS SCNGTGEIST PCNTCSGDGR LRKSKRISLK VPAGVDSGSR
301: LRVRNEGNAG RRGGSPGDLF VVIEVIPDPV LKRDDTNILY TCKVSYIDAI LGTTIKVPTV DGTVDLKIPA GTQPNTTLVM AKKGVPFLNK DNMRGDQLVR
401: VQVEIPKRLS NDERKLIEEL ADLSKGKTAT GRR

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.