Factsheet for VIT_00s0324g00040.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105340.2.1	Tomato	plastid	62.16	84.7
PGSC0003DMT400032760	Potato	plastid	72.56	78.43
KRH59311	Soybean	plastid	70.27	78.06
KRH43163	Soybean	plastid	70.27	77.35
KRH31310	Soybean	nucleus, plastid	70.48	77.05
KRG97564	Soybean	plastid	69.85	76.36
Bra030245.1-P	Field mustard	plastid	71.73	76.33
AT4G39960.1	Thale cress	mitochondrion, plastid	70.89	76.29
AT2G22360.1	Thale cress	plastid	70.06	76.24
CDY25588	Canola	plastid	71.93	76.21
CDX89453	Canola	plastid	71.31	75.89
TraesCS5A01G115000.1	Wheat	plastid	65.28	75.66
GSMUA_Achr3P00920_001	Banana	mitochondrion	69.85	74.34
GSMUA_Achr1P15780_001	Banana	plastid	67.78	73.26
Os05t0333500-01	Rice	mitochondrion, plastid	67.36	72.48
Os05t0334000-01	Rice	mitochondrion, plastid	67.36	72.48
Os05t0334400-01	Rice	mitochondrion, plastid	67.36	72.48
EES13204	Sorghum	plastid	67.36	72.32
CDY63891	Canola	cytosol	70.89	70.16
CDX69371	Canola	mitochondrion	70.89	68.06
Zm00001d024635_P001	Maize	mitochondrion	67.15	65.52
TraesCS5B01G115900.1	Wheat	plastid	65.28	65.01
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	66.74	64.85
Zm00001d047195_P001	Maize	mitochondrion	44.07	64.24
Bra011820.1-P	Field mustard	cytosol	70.48	64.08
GSMUA_Achr4P20410_001	Banana	cytosol	68.81	63.05
TraesCS5D01G125500.1	Wheat	nucleus	65.07	58.18
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	65.7	54.2
VIT_09s0002g07210.t01	Wine grape	plastid	45.53	44.79
VIT_17s0000g02030.t01	Wine grape	plastid	35.97	35.97
VIT_13s0064g01360.t01	Wine grape	mitochondrion	32.43	34.59
VIT_08s0105g00350.t01	Wine grape	cytosol	21.21	30.18
VIT_04s0008g04300.t01	Wine grape	cytosol	21.21	30.09
VIT_07s0005g01220.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	21.41	29.86
VIT_01s0026g01450.t01	Wine grape	cytosol	16.84	29.67
VIT_10s0003g00260.t01	Wine grape	cytosol	21.0	29.53
VIT_18s0001g06970.t01	Wine grape	endoplasmic reticulum, extracellular	20.79	28.82
VIT_06s0080g01230.t01	Wine grape	cytosol	24.32	28.06
VIT_13s0073g00560.t01	Wine grape	cytosol	24.12	27.88
VIT_17s0000g05530.t01	Wine grape	cytoskeleton, cytosol, nucleus	19.13	26.36
VIT_15s0021g02090.t01	Wine grape	cytosol	23.49	25.51
VIT_12s0034g02190.t01	Wine grape	nucleus	9.15	12.83

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	ProteinID:CCB61064	ProteinID:CCB61064.1
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	UniProt:F6I297	EMBL:FN596535
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGR:TC62173	TIGR:TC62235	TIGRFAMs:TIGR02349
UniParc:UPI000210AAB6	ArrayExpress:VIT_00s0324g00040	EnsemblPlantsGene:VIT_00s0324g00040	EnsemblPlants:VIT_00s0324g00040.t01	unigene:Vvi.12605	SEG:seg

Description

No Description!

Coordinates

chrUn:+:23409521..23422273

Molecular Weight (calculated)

52153.2 Da

IEP (calculated)

9.605

GRAVY (calculated)

-0.448

Length

481 amino acids

Sequence
(BLAST)

001: MAIVPCGTTW PAQWGIRPQF MLRSSITNKL PRSNYGVSSK INYLASACSS LFSQGSLHAF IYAGSSQTSH NRRGARFTVR ADSDFYSVLG VSKNASKSEI
101: KSAYRKLARS YHPDVNKEPN AEQKFKEISN AYELKNSYRK LARSYHPDVN KEPNAEQKFK EISNAYEVLS DDEKRSLYDR YGEAGLKGAG MGMGDFSNPF
201: DLFESLFEGM GGMGGMGGMG GMGGRSSRSR VVDGEDEYYN LVLKFNEAVF GVEKEIEITR LETCGTCNGS GAKPGTTPTT CSTCGGQGQV VSSARTPLGV
301: FQQVMTCSSC GGTGELSTPC TACSGDSRVR RTKRISLKVP AGVDSGSRLR VRSEGNAGRR GGAPGDLFVM IEVIPDPILK RDDNNILYSC KVSYIDAILG
401: TTLKVPTVDG MVDLKIPAGT QPNTTLVMAK KGVPLLNKSN MRGDQLVRVQ VEIPKRLSSE EKKLIEELAN LSKGKAATSR R

Best Arabidopsis Sequence Match ( AT2G22360.1 )
(BLAST)

001: MAIIQLGSTC VAQWSIRPQF AVRAYYPSRI ESTRHQNSSS QVNCLGASKS SMFSHGSLPF LSMTGMSRNM HPPRRGSRFT VRADADYYSV LGVSKNATKA
101: EIKSAYRKLA RNYHPDVNKD PGAEEKFKEI SNAYEVLSDD EKKSLYDRYG EAGLKGAAGF GNGDFSNPFD LFDSLFEGFG GGMGRGSRSR AVDGQDEYYT
201: LILNFKEAVF GMEKEIEISR LESCGTCEGS GAKPGTKPTK CTTCGGQGQV VSAARTPLGV FQQVMTCSSC NGTGEISTPC GTCSGDGRVR KTKRISLKVP
301: AGVDSGSRLR VRGEGNAGKR GGSPGDLFVV IEVIPDPILK RDDTNILYTC KISYIDAILG TTLKVPTVDG TVDLKVPAGT QPSTTLVMAK KGVPVLNKSN
401: MRGDQLVRVQ VEIPKRLSKE EKKLIEELAD MSKNKTANST SR

Arabidopsis Description

DJA6Chaperone protein dnaJ A6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SJZ7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.