Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
- golgi 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH69388 | Soybean | cytosol | 63.0 | 62.32 |
| KRG99186 | Soybean | cytosol | 64.1 | 60.55 |
| KRH45833 | Soybean | cytosol | 64.1 | 60.55 |
| KRH74747 | Soybean | cytosol | 59.71 | 58.84 |
| CDY37986 | Canola | cytosol | 49.08 | 56.78 |
| PGSC0003DMT400045398 | Potato | mitochondrion | 62.64 | 54.98 |
| Solyc05g006820.2.1 | Tomato | plastid | 62.27 | 54.66 |
| PGSC0003DMT400007444 | Potato | cytosol | 61.54 | 54.19 |
| CDY20944 | Canola | cytosol | 58.97 | 52.79 |
| Solyc04g005820.2.1 | Tomato | cytosol, nucleus | 60.81 | 51.88 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 61.9 | 51.06 |
| CDY20637 | Canola | cytosol | 58.61 | 50.0 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 60.07 | 49.55 |
| VIT_17s0000g05530.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 63.0 | 49.28 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 60.44 | 48.96 |
| Bra027838.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 60.81 | 48.82 |
| KRH60063 | Soybean | endoplasmic reticulum, golgi | 35.16 | 48.48 |
| Bra018443.1-P | Field mustard | nucleus | 60.07 | 46.99 |
| AT1G10350.1 | Thale cress | cytosol | 59.71 | 46.7 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 56.04 | 45.27 |
| VIT_10s0003g00260.t01 | Wine grape | cytosol | 56.41 | 45.03 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 53.48 | 43.07 |
| VIT_07s0005g01220.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 34.43 | 27.25 |
| VIT_13s0073g00560.t01 | Wine grape | cytosol | 38.83 | 25.48 |
| VIT_06s0080g01230.t01 | Wine grape | cytosol | 38.1 | 24.94 |
| VIT_15s0021g02090.t01 | Wine grape | cytosol | 38.46 | 23.7 |
| VIT_12s0034g02190.t01 | Wine grape | nucleus | 27.84 | 22.16 |
| VIT_13s0064g01360.t01 | Wine grape | mitochondrion | 28.94 | 17.52 |
| VIT_17s0000g02030.t01 | Wine grape | plastid | 30.4 | 17.26 |
| VIT_09s0002g07210.t01 | Wine grape | plastid | 30.4 | 16.97 |
| VIT_00s0324g00040.t01 | Wine grape | plastid | 29.67 | 16.84 |
| VIT_18s0001g06970.t01 | Wine grape | endoplasmic reticulum, extracellular | 20.15 | 15.85 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:100251972 | wikigene:100251972 | Gene3D:2.60.260.20 | MapMan:35.1 | EMBL:AM460488 |
| ProteinID:CAN83269 | ProteinID:CAN83269.1 | ProteinID:CCB56590 | ProteinID:CCB56590.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | UniProt:F6HPG2 | EMBL:FN596002 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | EntrezGene:LOC100251972 | wikigene:LOC100251972 | PFAM:PF00226 | PFAM:PF01556 |
| PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF524 | SMART:SM00271 |
| SUPFAM:SSF46565 | SUPFAM:SSF49493 | TIGR:TC65028 | UniParc:UPI00015CB238 | ArrayExpress:VIT_01s0026g01450 | EnsemblPlantsGene:VIT_01s0026g01450 |
| EnsemblPlants:VIT_01s0026g01450.t01 | unigene:Vvi.12468 | RefSeq:XP_002274519 | RefSeq:XP_002274519.1 | : | : |
Description
No Description!
Coordinates
chr1:+:10418267..10420055
Molecular Weight (calculated)
31047.7 Da
IEP (calculated)
10.048
GRAVY (calculated)
-0.544
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADYYKLLR VNRNASAEEL KKAYKRLAIK WHPDKNPNHN RVEAEAKFKQ ISEAYDVLSD SRKRQIYDLY GYQYASFNHR DARDVFAELF GSGGKAMEKR
101: LDCSLEELYQ GSKREIKISR TVIRESGKAR IVEETLLITI GPGWKKGTKI TFPMKGNQEP GMTPSDLIFV VHEKPHALYE REGNDLVVKQ SISLLDALTG
201: KTLILTTLDG RNLTIPVTDI VRPGYVMVVP DEGMPMSKEP TKKGNLKIKF DVKFPPRLTA QQKYEVKRVL VGG
101: LDCSLEELYQ GSKREIKISR TVIRESGKAR IVEETLLITI GPGWKKGTKI TFPMKGNQEP GMTPSDLIFV VHEKPHALYE REGNDLVVKQ SISLLDALTG
201: KTLILTTLDG RNLTIPVTDI VRPGYVMVVP DEGMPMSKEP TKKGNLKIKF DVKFPPRLTA QQKYEVKRVL VGG
001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.