Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g005820.2.1 | Tomato | cytosol, nucleus | 98.39 | 95.31 |
| PGSC0003DMT400045398 | Potato | mitochondrion | 78.71 | 78.46 |
| KRH74747 | Soybean | cytosol | 57.42 | 64.26 |
| KRH69388 | Soybean | cytosol | 57.1 | 64.13 |
| PGSC0003DMT400083040 | Potato | cytosol | 68.39 | 62.91 |
| CDY20944 | Canola | cytosol | 61.61 | 62.62 |
| VIT_01s0026g01450.t01 | Wine grape | cytosol | 54.19 | 61.54 |
| KRG99186 | Soybean | cytosol | 57.1 | 61.25 |
| KRH45833 | Soybean | cytosol | 57.1 | 61.25 |
| CDY45143 | Canola | cytoskeleton, cytosol, nucleus | 64.19 | 60.12 |
| CDY20637 | Canola | cytosol | 60.97 | 59.06 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 62.9 | 58.91 |
| CDY30900 | Canola | cytoskeleton, cytosol, nucleus | 63.87 | 58.75 |
| Bra027838.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 64.19 | 58.53 |
| CDY37986 | Canola | cytosol | 44.52 | 58.47 |
| AT1G10350.1 | Thale cress | cytosol | 63.55 | 56.45 |
| PGSC0003DMT400059397 | Potato | cytosol | 61.61 | 56.18 |
| Bra018443.1-P | Field mustard | nucleus | 62.9 | 55.87 |
| PGSC0003DMT400083824 | Potato | cytosol | 56.13 | 53.7 |
| PGSC0003DMT400081223 | Potato | cytosol | 59.03 | 53.67 |
| PGSC0003DMT400024267 | Potato | cytoskeleton, cytosol, nucleus | 58.39 | 52.92 |
| KRH60063 | Soybean | endoplasmic reticulum, golgi | 33.55 | 52.53 |
| PGSC0003DMT400062759 | Potato | cytosol | 35.48 | 31.7 |
| PGSC0003DMT400023249 | Potato | endoplasmic reticulum, golgi | 35.16 | 31.59 |
| PGSC0003DMT400007728 | Potato | nucleus | 39.03 | 28.88 |
| PGSC0003DMT400060145 | Potato | cytosol | 39.03 | 28.88 |
| PGSC0003DMT400005019 | Potato | cytosol | 38.71 | 28.64 |
| PGSC0003DMT400065401 | Potato | nucleus | 38.39 | 28.4 |
| PGSC0003DMT400066980 | Potato | nucleus | 37.74 | 27.86 |
| PGSC0003DMT400018083 | Potato | nucleus | 36.77 | 27.21 |
| PGSC0003DMT400045241 | Potato | extracellular, mitochondrion | 30.0 | 24.16 |
| PGSC0003DMT400032760 | Potato | plastid | 32.26 | 22.47 |
| PGSC0003DMT400064990 | Potato | mitochondrion | 26.45 | 18.51 |
| PGSC0003DMT400036786 | Potato | plastid | 27.74 | 16.17 |
Protein Annotations
| Gene3D:1.10.287.110 | EntrezGene:102599345 | Gene3D:2.60.260.20 | MapMan:35.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| UniProt:M0ZT02 | PFAM:PF00226 | PFAM:PF01556 | EnsemblPlantsGene:PGSC0003DMG400002867 | PGSC:PGSC0003DMG400002867 | EnsemblPlants:PGSC0003DMT400007444 |
| PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF175 | SMART:SM00271 |
| SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI0002955C2D | RefSeq:XP_006344289.1 | SEG:seg | : |
Description
Potyviral capsid protein interacting protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400002867]
Coordinates
chr4:-:414783..419368
Molecular Weight (calculated)
34821.4 Da
IEP (calculated)
9.752
GRAVY (calculated)
-0.771
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVDYYKTLK VSRNASEEDL KKSYKRLAMK WHPDKNSENK KEAEAKFKQI SEAYDVLSDP QKRQIYDIYG DEALKSGQFD PSSPSDRRGF KFNSRDAEDI
101: FAEFFGGSDG YSRSTGGTVR IRKAAPVENN LPCSLEELYK GSKRKMKISR IVLDGTGKPT TIEEVLAIHI KPGWKKGTKI TFPEKGNHEP GAAPGDLIFV
201: IDEKPHDVFK RDGNDLVINQ KISLVDALAG KTINLTALDG RELTIPITDV VKPGHEQKIP NEGMPISKEP GKKGNLRIKF EVKFPSRLSS DQKCDIRRVL
301: GRTADYHGYT
101: FAEFFGGSDG YSRSTGGTVR IRKAAPVENN LPCSLEELYK GSKRKMKISR IVLDGTGKPT TIEEVLAIHI KPGWKKGTKI TFPEKGNHEP GAAPGDLIFV
201: IDEKPHDVFK RDGNDLVINQ KISLVDALAG KTINLTALDG RELTIPITDV VKPGHEQKIP NEGMPISKEP GKKGNLRIKF EVKFPSRLSS DQKCDIRRVL
301: GRTADYHGYT
001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.