Factsheet for PGSC0003DMT400066980

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g090550.2.1	Tomato	nucleus	95.24	94.34
PGSC0003DMT400018083	Potato	nucleus	80.71	80.91
GSMUA_Achr11P...	Banana	cytosol	70.71	77.95
GSMUA_Achr8P11020_001	Banana	nucleus	71.9	75.5
EES07516	Sorghum	nucleus	75.0	75.0
PGSC0003DMT400005019	Potato	cytosol	74.76	74.94
Zm00001d017476_P001	Maize	plasma membrane	74.52	74.17
Os02t0656500-01	Rice	nucleus	73.81	73.81
TraesCS6D01G232600.1	Wheat	nucleus	74.52	73.65
TraesCS6B01G274600.1	Wheat	nucleus	74.52	73.65
TraesCS6A01G250800.1	Wheat	nucleus	74.52	73.65
KRH66593	Soybean	endoplasmic reticulum	73.57	73.57
KRH48754	Soybean	endoplasmic reticulum	73.1	73.1
PGSC0003DMT400060145	Potato	cytosol	72.62	72.79
VIT_15s0021g02090.t01	Wine grape	cytosol	76.43	72.46
PGSC0003DMT400065401	Potato	nucleus	71.9	72.08
Os04t0549600-01	Rice	cytosol	70.95	71.63
OQU82085	Sorghum	nucleus	71.19	71.53
PGSC0003DMT400007728	Potato	nucleus	70.0	70.17
HORVU0Hr1G016360.1	Barley	cytosol	28.57	67.8
HORVU0Hr1G018300.1	Barley	plastid	75.0	65.08
PGSC0003DMT400007444	Potato	cytosol	27.86	37.74
PGSC0003DMT400045398	Potato	mitochondrion	27.38	36.98
PGSC0003DMT400083824	Potato	cytosol	28.33	36.73
PGSC0003DMT400081223	Potato	cytosol	29.52	36.36
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	29.05	35.67
PGSC0003DMT400023249	Potato	endoplasmic reticulum, golgi	29.29	35.65
PGSC0003DMT400059397	Potato	cytosol	28.81	35.59
PGSC0003DMT400083040	Potato	cytosol	26.19	32.64
PGSC0003DMT400032760	Potato	plastid	26.67	25.17
PGSC0003DMT400062759	Potato	cytosol	19.05	23.05
PGSC0003DMT400064990	Potato	mitochondrion	24.05	22.8
PGSC0003DMT400036786	Potato	plastid	27.14	21.43
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	14.52	15.84

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:102590096	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
UniProt:M1CGG6	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	EnsemblPlantsGene:PGSC0003DMG400026036
PGSC:PGSC0003DMG400026036	EnsemblPlants:PGSC0003DMT400066980	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43888	PANTHER:PTHR43888:SF11	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI000294B0BF	RefSeq:XP_006347935.1	RefSeq:XP_015164496.1	RefSeq:XP_015164497.1	SEG:seg	:

Description

DnaJ homolog protein [Source:PGSC_GENE;Acc:PGSC0003DMG400026036]

Coordinates

chr1:+:69766024..69772325

Molecular Weight (calculated)

47088.5 Da

IEP (calculated)

6.741

GRAVY (calculated)

-0.762

Length

420 amino acids

Sequence
(BLAST)

001: MFGRAPRRSD NSKYYEVLGV SKSASQDELK KAYRKAAIRN HPDKGGDPEK FKELAQAYEV LSDPEKRDIY DQYGEDALKE GMGSGGGGVH NHFDIFESFF
101: SGSFGGGGSR FRASRQKRGE DVVHTLRVSL EDLYNGTTKK LSLSRSILCP KCKGKGSKSG ASGACYGCQG TGMRVTTRQI APGMIQQMQH VCPECRGSGE
201: VISDSDRCPQ CKGNKVTQEK KVLEVNVEKG MEHNQKITFE GEADQAPDII TGDIVFVLQQ KEHPKFKRKF DDLYMEHTLT LTEALCGFQF VLTHLDGRQL
301: LIKSNPGEVI KPDHYKAIND EGMPNFGKPF IKGRLYIHFD VVFPESGVLS PDTCRSIETI LLSRPGKSSS ETNLDECEET IMHDVNIEEE MRRKDQRRHQ
401: EAYDSDDDEP NVHRVACNQQ

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.