Factsheet for Os02t0656500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

nucleus: 19621931
nucleus: 23777608
plasma membrane: 27800704
plasma membrane: 28056797

msms PMID: 23777608 doi

H Mujahid, F Tan, J Zhang, BR Nallamilli, K Pendarvis, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, MS 39762, USA.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07516	Sorghum	nucleus	89.76	89.76
Zm00001d017476_P001	Maize	plasma membrane	89.29	88.86
TraesCS6D01G232600.1	Wheat	nucleus	88.1	87.06
TraesCS6B01G274600.1	Wheat	nucleus	88.1	87.06
TraesCS6A01G250800.1	Wheat	nucleus	88.1	87.06
HORVU0Hr1G016360.1	Barley	cytosol	35.95	85.31
Os04t0549600-01	Rice	cytosol	80.48	81.25
GSMUA_Achr8P11020_001	Banana	nucleus	76.19	80.0
GSMUA_Achr11P...	Banana	cytosol	72.14	79.53
HORVU0Hr1G018300.1	Barley	plastid	89.05	77.27
Os03t0648400-02	Rice	nucleus	73.81	74.34
Os03t0787300-01	Rice	plasma membrane	73.33	73.86
PGSC0003DMT400066980	Potato	nucleus	73.81	73.81
KRH66593	Soybean	endoplasmic reticulum	73.57	73.57
KRH48754	Soybean	endoplasmic reticulum	72.62	72.62
Solyc01g090550.2.1	Tomato	nucleus	73.1	72.41
PGSC0003DMT400018083	Potato	nucleus	71.9	72.08
VIT_15s0021g02090.t01	Wine grape	cytosol	73.33	69.53
Solyc05g050820.2.1	Tomato	cytosol	36.19	63.87
Solyc05g050810.2.1	Tomato	nucleus	30.24	49.42
Os12t0619100-00	Rice	cytosol	43.1	42.09
Os05t0156500-01	Rice	cytosol, nucleus	12.86	36.99
Os05t0562300-01	Rice	nucleus	28.81	33.43
Os08t0161900-01	Rice	cytosol	27.14	33.33
Os02t0306900-01	Rice	cytosol	27.62	33.24
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	27.38	32.95
Os05t0427900-01	Rice	cytosol	11.9	31.65
Os02t0128400-01	Rice	cytosol	25.0	30.97
Os01t0875700-01	Rice	cytosol	19.05	24.46
Os06t0116800-01	Rice	mitochondrion	25.71	24.43
Os05t0334400-01	Rice	mitochondrion, plastid	25.71	24.16
Os05t0334000-01	Rice	mitochondrion, plastid	25.71	24.16
Os05t0333500-01	Rice	mitochondrion, plastid	25.71	24.16
Os02t0804500-01	Rice	plastid	27.38	23.61
Os12t0168400-01	Rice	plastid	23.33	23.39
Os08t0374400-00	Rice	plastid	21.19	22.88

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:4330201	ProteinID:BAF09540.1
ProteinID:BAS80102.1	ProteinID:BAS80103.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	EnsemblPlantsGene:Os02g0656500	EnsemblPlants:Os02t0656500-01
PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PFscan:PS51188	PANTHER:PTHR43888	PANTHER:PTHR43888:SF1	UniProt:Q0DYZ8	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI00000A00CE	RefSeq:XP_015626316.1	SEG:seg	:

Description

DnaJ domain protein A1DnaJ-like protein. (Os02t0656500-01);Similar to DnaJ-like protein. (Os02t0656500-02)

Coordinates

chr2:+:26519337..26523355

Molecular Weight (calculated)

47136.0 Da

IEP (calculated)

7.352

GRAVY (calculated)

-0.839

Length

420 amino acids

Sequence
(BLAST)

001: MYGRMPKKSN NTKYYEVLGV SKTATQDELK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LNDPEKREIY DQYGEDALKE GMGGGSSSDF HSPFDLFEQI
101: FQNRGGFGGR GHRQKRGEDV VHTMKVSLED LYNGTTKKLS LSRNALCTKC KGKGSKSGAA ATCHGCHGAG MRTITRQIGL GMIQQMNTVC PECRGSGEMI
201: SDKDKCPSCK GNKVVQQKKV LEVHVEKGMQ HGQKIVFQGE ADEAPDTVTG DIVFVLQLKD HPKFKRKFDD LFTEHTISLT EALCGFQFVL THLDGRQLLI
301: KSNPGEVIKP GQHKAINDEG MPQHGRPFMK GRLFVEFNVE FPEPGALTPG QCRSLEKILP PRPRNQLSDM ELDQCEETTM HDVNIEEEMR RRQQHRRQEA
401: YDEDDDEDAG AGPRVQCAQQ

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.