Factsheet for Os05t0562300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 2
golgi 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039000_P001	Maize	mitochondrion	92.27	92.27
EES19943	Sorghum	cytosol	91.99	91.99
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	87.57	90.31
TraesCS1D01G403500.1	Wheat	cytosol	85.91	86.15
HORVU1Hr1G087070.1	Barley	cytosol	87.29	85.64
TraesCS1A01G395300.1	Wheat	cytosol	86.46	84.14
TraesCS1B01G423600.1	Wheat	cytosol	87.57	83.86
GSMUA_Achr3P15480_001	Banana	cytosol	65.19	80.82
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	71.55	75.73
Os02t0306900-01	Rice	cytosol	70.17	72.78
Solyc07g053620.2.1	Tomato	nucleus	42.54	68.75
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	63.54	65.9
Os08t0161900-01	Rice	cytosol	56.08	59.36
GSMUA_Achr6P13820_001	Banana	cytosol	26.52	56.14
Os02t0128400-01	Rice	cytosol	48.34	51.62
Os05t0427900-01	Rice	cytosol	18.51	42.41
Os08t0374400-00	Rice	plastid	43.09	40.1
Os01t0875700-01	Rice	cytosol	35.08	38.84
Os05t0156500-01	Rice	cytosol, nucleus	14.64	36.3
Os03t0787300-01	Rice	plasma membrane	35.91	31.18
Os03t0648400-02	Rice	nucleus	35.08	30.46
Os04t0549600-01	Rice	cytosol	34.25	29.81
Os02t0656500-01	Rice	nucleus	33.43	28.81
Os12t0619100-00	Rice	cytosol	29.56	24.88
Os05t0333500-01	Rice	mitochondrion, plastid	30.66	24.83
Os05t0334000-01	Rice	mitochondrion, plastid	30.66	24.83
Os05t0334400-01	Rice	mitochondrion, plastid	30.66	24.83
Os12t0168400-01	Rice	plastid	26.52	22.91
Os02t0804500-01	Rice	plastid	30.66	22.79
Os06t0116800-01	Rice	mitochondrion	27.35	22.4

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EntrezGene:4339609	ProteinID:AAU10651.1	EMBL:AK067414
ProteinID:BAF18234.1	ProteinID:BAS95332.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	ProteinID:EEE64688.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlantsGene:Os05g0562300
EnsemblPlants:Os05t0562300-01	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	UniProt:Q688X8	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
UniParc:UPI000042ABA0	RefSeq:XP_015637533.1	SEG:seg	:	:	:

Description

DnaJ domain protein B7Similar to DnaJ-like protein. (Os05t0562300-01)

Coordinates

chr5:-:27972462..27974607

Molecular Weight (calculated)

38681.2 Da

IEP (calculated)

9.495

GRAVY (calculated)

-0.509

Length

362 amino acids

Sequence
(BLAST)

001: MGMDYYKILG VDKAASDDDL KKAYRKLAMK WHPDKNPNNK KEAENKFKQI SEAYEVLSDP QKRAVYDQYG EEGLKGQVPP PGAGGAGPGG ATFFSTGGDG
101: PNVFRFNPRN AEDIFAEFFG SSSPFGGMGG GMGGGMGGGP GMRTGGTRFS SSIFGDDIFG SAFGGGADGH HGMHGGGAGR ALKAPAIERK LPCSLEELYK
201: GTTKKMKISR EIADASGKTI PVEEILTIDV KPGWKKGTKI TFPEKGNEQP NVIPADLVFI IDEKPHPVFT RDGNDLVVTQ KIPLAEALTG HTVHLTTLDG
301: RSLTIPITSV INPGYEEVVR GEGMPIPKDP SKKGNLRVKF DIKFPARLTA DQKSGVKRLL GQ

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.