Factsheet for Zm00001d039000_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19943	Sorghum	cytosol	97.79	97.79
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	91.44	94.3
Os05t0562300-01	Rice	nucleus	92.27	92.27
TraesCS1D01G403500.1	Wheat	cytosol	86.74	86.98
HORVU1Hr1G087070.1	Barley	cytosol	88.12	86.45
TraesCS1A01G395300.1	Wheat	cytosol	87.29	84.95
TraesCS1B01G423600.1	Wheat	cytosol	88.4	84.66
GSMUA_Achr3P15480_001	Banana	cytosol	65.75	81.51
PGSC0003DMT400024267	Potato	cytoskeleton, cytosol, nucleus	70.17	74.27
Zm00001d016440_P001	Maize	cytosol	69.06	72.25
Zm00001d009027_P001	Maize	cytosol	65.47	70.54
Solyc07g053620.2.1	Tomato	nucleus	42.27	68.3
Zm00001d010958_P001	Maize	cytosol	56.91	63.19
Zm00001d024527_P001	Maize	cytosol	54.14	56.32
GSMUA_Achr6P13820_001	Banana	cytosol	26.24	55.56
Zm00001d039259_P001	Maize	nucleus	64.92	54.52
Zm00001d032347_P001	Maize	cytosol	49.45	52.49
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	45.03	38.44
Zm00001d012242_P001	Maize	cytosol	32.32	37.03
Zm00001d009783_P004	Maize	mitochondrion	33.7	34.86
Zm00001d037586_P001	Maize	endoplasmic reticulum	34.25	33.79
Zm00001d038250_P001	Maize	cytosol	29.28	31.64
Zm00001d034368_P001	Maize	extracellular, plasma membrane	36.46	31.58
Zm00001d013111_P001	Maize	extracellular, plasma membrane	36.19	31.41
Zm00001d033210_P002	Maize	nucleus	35.36	30.55
Zm00001d042653_P001	Maize	plastid	32.04	29.0
Zm00001d017476_P001	Maize	plasma membrane	33.7	28.91
Zm00001d013669_P002	Maize	cytosol	34.81	28.06
Zm00001d009210_P001	Maize	endoplasmic reticulum	29.01	25.86
Zm00001d048538_P001	Maize	nucleus	22.65	25.23
Zm00001d026185_P001	Maize	endoplasmic reticulum	33.15	23.86
Zm00001d035975_P001	Maize	mitochondrion	27.35	23.08
Zm00001d035974_P001	Maize	mitochondrion	27.07	22.84
Zm00001d024635_P001	Maize	mitochondrion	30.39	22.31
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	30.11	22.02
Zm00001d023537_P002	Maize	mitochondrion	25.41	21.65
Zm00001d006666_P001	Maize	nucleus	17.4	21.5
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	10.22	20.11
Zm00001d006230_P001	Maize	cytosol	15.75	19.66
Zm00001d018413_P003	Maize	mitochondrion	30.66	19.51
Zm00001d006563_P001	Maize	mitochondrion	14.64	19.49
Zm00001d028256_P002	Maize	plastid	26.8	18.03
Zm00001d052001_P002	Maize	plastid	29.83	17.59
Zm00001d047195_P001	Maize	mitochondrion	16.02	17.58
Zm00001d045645_P001	Maize	cytosol	12.71	17.29
Zm00001d004840_P001	Maize	mitochondrion	16.02	16.91
Zm00001d044878_P002	Maize	mitochondrion	20.72	15.31

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	ProteinID:AQK88434.1	UniProt:B4FT54	EMBL:BT040292
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF520	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
UniParc:UPI00017B8083	EnsemblPlantsGene:Zm00001d039000	EnsemblPlants:Zm00001d039000_P001	EnsemblPlants:Zm00001d039000_T001	SEG:seg	:

Description

HSP40/DnaJ peptide-binding protein

Coordinates

chr6:-:168516159..168518324

Molecular Weight (calculated)

38654.1 Da

IEP (calculated)

9.473

GRAVY (calculated)

-0.511

Length

362 amino acids

Sequence
(BLAST)

001: MGLDYYKILG VDKGATDDDL KKAYRKLAMK WHPDKNPNNK KEAENKFKQI SEAYEVLSDP QKRAVYDQYG EEGLKGQVPP PGAGGAGPGG ATFFSTGGDG
101: PTVFRFNPRN AEDIFAEFFG GSSPFGGMGG GGMGGSGMGG GMPGMRSGGT RFSSSIFGDD IFGSAFGGGP DGHGMHAGGR AVKAPAIERK LPCSLEELYK
201: GTTKKMKISR EISDASGKTI PVEEILTIDV KPGWKKGTKI TFPEKGNETP NTIPADLVFI IDEKPHPVFT RDGNDLVVTQ KIPLAEALTG YTAHVTTLDG
301: RSLTVPISSV IHPGYEEVVR GEGMPIPKDP SRKGNLRIKF DIKFPARLTA DQKSGVKRLL GQ

Best Arabidopsis Sequence Match ( AT2G20560.1 )
(BLAST)

001: MGVDYYKVLQ VDRSASDDDL KKAYRKLAMK WHPDKNPNNK KDAEAMFKQI SEAYEVLSDP QKKAVYDQYG EEGLKGNVPP PDAGGATYFS TGDGPTSFRF
101: NPRNADDIFA EFFGFSSPFG GGRGGTRFSS SMFGDNMFAS FGEGGGGGGG SMHHGGARKA APIENKLPCS LEDLYKGTTK KMRISREIAD VSGKTMQVEE
201: ILTIDVKPGW KKGTKITFPE KGNEQPGVIP ADLVFIIDEK PHPVFTREGN DLIVTQKISL VEALTGYTVN LTTLDGRRLT IPVTNVVHPE YEEVVPKEGM
301: PLQKDQTKRG NLRIKFNIKF PTRLTSEQKT GVKKLLG

Arabidopsis Description

At2g20560/T13C7.15 [Source:UniProtKB/TrEMBL;Acc:Q9SIL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.