Factsheet for Zm00001d006666_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045645_P001	Maize	cytosol	65.19	71.8
Zm00001d006230_P001	Maize	cytosol	67.24	67.93
Zm00001d013111_P001	Maize	extracellular, plasma membrane	93.86	65.95
KXG37403	Sorghum	cytosol	92.15	64.59
Zm00001d034368_P001	Maize	extracellular, plasma membrane	91.47	64.11
Zm00001d004840_P001	Maize	mitochondrion	72.7	62.1
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	38.91	61.96
Zm00001d006563_P001	Maize	mitochondrion	57.34	61.76
Os03t0787300-01	Rice	plasma membrane	86.01	60.43
Zm00001d048538_P001	Maize	nucleus	66.55	60.0
TraesCS5D01G434100.1	Wheat	nucleus	84.64	58.91
TraesCS5B01G428000.1	Wheat	nucleus	84.64	58.91
HORVU5Hr1G103680.1	Barley	cytosol	84.3	58.67
TraesCS5A01G426100.1	Wheat	nucleus	84.3	58.67
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	57.0	57.19
KRH22611	Soybean	nucleus	80.89	56.83
KRH25334	Soybean	nucleus	80.89	56.83
KRG88903	Soybean	nucleus	80.55	56.59
KRH26709	Soybean	nucleus	79.86	56.12
VIT_06s0080g01230.t01	Wine grape	cytosol	79.86	56.12
VIT_13s0073g00560.t01	Wine grape	cytosol	78.16	55.05
Solyc04g009770.2.1	Tomato	nucleus	78.5	55.02
Zm00001d026185_P001	Maize	endoplasmic reticulum	93.52	54.47
Zm00001d033210_P002	Maize	nucleus	77.47	54.18
PGSC0003DMT400065401	Potato	nucleus	77.47	54.18
AT3G44110.1	Thale cress	nucleus	76.11	53.1
Bra002385.1-P	Field mustard	nucleus	76.11	52.84
Bra002386.1-P	Field mustard	nucleus	76.11	52.84
CDX92386	Canola	nucleus	76.11	52.84
CDX92385	Canola	nucleus	76.11	52.84
CDY65546	Canola	nucleus	75.77	52.73
CDY09117	Canola	nucleus	75.09	52.01
Bra020169.1-P	Field mustard	nucleus	74.74	51.77
Zm00001d013669_P002	Maize	cytosol	77.82	50.78
CDY16617	Canola	nucleus	35.84	50.48
AT5G22060.1	Thale cress	cytosol	70.99	49.64
Bra006608.1-P	Field mustard	nucleus	67.24	48.28
CDX88812	Canola	nucleus	67.24	48.28
CDX70980	Canola	nucleus	66.55	47.91
Zm00001d017476_P001	Maize	plasma membrane	65.53	45.5
Zm00001d009783_P004	Maize	mitochondrion	26.28	22.0
Zm00001d037586_P001	Maize	endoplasmic reticulum	26.28	20.98
Zm00001d047195_P001	Maize	mitochondrion	20.48	18.18
Zm00001d009027_P001	Maize	cytosol	20.48	17.86
Zm00001d024527_P001	Maize	cytosol	21.16	17.82
Zm00001d009556_P001	Maize	cytoskeleton, cytosol, nucleus	21.16	17.66
Zm00001d039000_P001	Maize	mitochondrion	21.5	17.4
Zm00001d032347_P001	Maize	cytosol	20.14	17.3
Zm00001d016440_P001	Maize	cytosol	20.14	17.05
Zm00001d010958_P001	Maize	cytosol	18.43	16.56
Zm00001d009210_P001	Maize	endoplasmic reticulum	21.16	15.27
Zm00001d035974_P001	Maize	mitochondrion	22.18	15.15
Zm00001d035975_P001	Maize	mitochondrion	21.84	14.92
Zm00001d012242_P001	Maize	cytosol	16.04	14.87
Zm00001d053972_P001	Maize	cytosol, golgi, plasma membrane	20.48	14.15
Zm00001d039259_P001	Maize	nucleus	19.45	13.23
Zm00001d024635_P001	Maize	mitochondrion	21.84	12.98
Zm00001d049583_P003	Maize	cytosol, mitochondrion, nucleus, plastid	21.84	12.93
Zm00001d038250_P001	Maize	cytosol	13.99	12.24
Zm00001d042653_P001	Maize	plastid	16.04	11.75
Zm00001d018413_P003	Maize	mitochondrion	22.53	11.6
Zm00001d023537_P002	Maize	mitochondrion	15.36	10.59
Zm00001d052001_P002	Maize	plastid	22.18	10.59
Zm00001d028256_P002	Maize	plastid	17.41	9.48
Zm00001d044878_P002	Maize	mitochondrion	12.29	7.35

Protein Annotations

Gene3D:2.10.230.10	Gene3D:2.60.260.20	MapMan:35.1	UniProt:A0A1D6EZH8	InterPro:DnaJ_C	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0031072
GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305
ProteinID:ONM24679.1	PFAM:PF00684	PFAM:PF01556	PFscan:PS51188	PANTHER:PTHR43888	PANTHER:PTHR43888:SF15
SUPFAM:SSF49493	SUPFAM:SSF57938	UniParc:UPI0008458641	EnsemblPlantsGene:Zm00001d006666	EnsemblPlants:Zm00001d006666_P001	EnsemblPlants:Zm00001d006666_T001
SEG:seg	:	:	:	:	:

Description

Chaperone protein dnaJ 3

Coordinates

chr2:+:213886498..213889409

Molecular Weight (calculated)

32479.5 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.686

Length

293 amino acids

Sequence
(BLAST)

001: MGGGGGMHDP FDLFQSFFGG GSPFGGGSSR GRTQRWGDDV VHPLKVSLED LYNGTSKKLS LSHNVLSSKC NGKGSKSGAS SRCAGCQCSG FKVQIRQLGP
101: GMIQQMQHPC NECKGSRETI SDKDRCPQCK GDKVVPEKKV FEVVVEKGMQ NGHKITFLGE ADEAFVLTHL DNRQLLIKSN PGEVVKPNSF KAINDEGMPM
201: YQRPFMKGKL YIHFSVEFSD LLSSEQCKAL EVVLPPKPVS QYTDMELDEC EDTMPYDVNI EEEMRRRQQQ HQEAYDEDDD VPGGGQRVQC AQQ

Best Arabidopsis Sequence Match ( AT3G44110.1 )
(BLAST)

001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ

Arabidopsis Description

ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.