Factsheet for HORVU5Hr1G103680.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G434100.1	Wheat	nucleus	99.29	99.29
TraesCS5B01G428000.1	Wheat	nucleus	99.29	99.29
TraesCS5A01G426100.1	Wheat	nucleus	99.05	99.05
KXG37403	Sorghum	cytosol	90.97	91.63
Os03t0787300-01	Rice	plasma membrane	90.02	90.89
Zm00001d034368_P001	Maize	extracellular, plasma membrane	90.02	90.67
Zm00001d013111_P001	Maize	extracellular, plasma membrane	89.31	90.17
KRH25334	Soybean	nucleus	85.75	86.57
KRH26709	Soybean	nucleus	85.51	86.33
KRG88903	Soybean	nucleus	85.51	86.33
KRH22611	Soybean	nucleus	85.04	85.85
VIT_06s0080g01230.t01	Wine grape	cytosol	84.56	85.37
VIT_13s0073g00560.t01	Wine grape	cytosol	83.61	84.62
Zm00001d006666_P001	Maize	nucleus	58.67	84.3
Solyc04g009770.2.1	Tomato	nucleus	83.37	83.97
Zm00001d048538_P001	Maize	nucleus	64.61	83.69
HORVU5Hr1G092610.3	Barley	nucleus	83.61	83.41
PGSC0003DMT400065401	Potato	nucleus	82.9	83.29
Zm00001d006230_P001	Maize	cytosol	55.11	80.0
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	55.34	79.79
Zm00001d045645_P001	Maize	cytosol	50.36	79.7
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	34.44	78.8
Zm00001d006563_P001	Maize	mitochondrion	48.69	75.37
Zm00001d026185_P001	Maize	endoplasmic reticulum	82.9	69.38
Zm00001d004840_P001	Maize	mitochondrion	55.82	68.51
HORVU0Hr1G016360.1	Barley	cytosol	28.03	66.67
HORVU0Hr1G018300.1	Barley	plastid	73.63	64.05
HORVU7Hr1G070170.1	Barley	cytosol	28.98	35.26
HORVU1Hr1G087070.1	Barley	cytosol	29.93	34.15
HORVU6Hr1G016170.1	Barley	cytosol	27.08	33.83
HORVU6Hr1G016080.3	Barley	cytosol	27.08	33.33
HORVU1Hr1G022990.1	Barley	cytosol	31.83	31.53
HORVU1Hr1G015040.2	Barley	plastid	26.84	29.5
HORVU3Hr1G032480.1	Barley	cytosol, nucleus	28.98	28.37
HORVU3Hr1G113710.2	Barley	plastid	21.14	26.25
HORVU3Hr1G081940.1	Barley	cytosol	19.48	25.31
HORVU1Hr1G015060.2	Barley	plastid	16.63	24.56
HORVU7Hr1G009230.8	Barley	plastid	25.42	24.04
HORVU0Hr1G017450.8	Barley	cytosol	27.08	23.55
HORVU5Hr1G036400.3	Barley	plastid	23.75	23.42
HORVU5Hr1G037600.2	Barley	cytosol, nucleus	27.08	19.55
HORVU4Hr1G066920.5	Barley	mitochondrion	25.89	19.19
HORVU7Hr1G073040.2	Barley	cytosol	9.03	16.38
HORVU0Hr1G000620.4	Barley	plastid	14.49	15.44

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EMBL:AK360735	ncoils:Coil
InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	UniProt:F2DA22	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950
GO:GO:0008150	GO:GO:0009408	GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872
GO:GO:0051082	EnsemblPlantsGene:HORVU5Hr1G103680	EnsemblPlants:HORVU5Hr1G103680.1	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226
PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188
PANTHER:PTHR43888	PANTHER:PTHR43888:SF15	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI0002005A5A	SEG:seg	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DA22]

Coordinates

chrchr5H:+:616902721..616905527

Molecular Weight (calculated)

46809.5 Da

IEP (calculated)

5.718

GRAVY (calculated)

-0.773

Length

421 amino acids

Sequence
(BLAST)

001: MFGRGPPKKS DSTRYYEILG VPKDASQDDL KKAYRKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGMHD PFDIFQSFFG
101: GGGNPFGGGG SSRGRRQRRG EDVVHPLKVS LEELYNGTSK KLSLARNVLC SKCNGKGSKS GASMKCAGCQ GAGYKVQIRQ LGPGMIQQMQ QPCNECRGSG
201: ETISDKDRCG QCKGEKVVHE KKVLEVVVEK GMQHGQKITF PGEADEAPDT VTGDIIFVLQ QKEHPKFKRK ADDLFYEHTL TLTEALCGFQ YVLAHLDGRQ
301: LLIKSNPGEV VKPDSFKAIN DEGMPMYQRP FMKGKLYIHF TVVFPDSLSL DQCKALETVL PPKPASQYTD MELDECEETM AYDIDIEEEM RRQQQQQAQE
401: AYDEDEDMPG GGGQRVQCAQ Q

Best Arabidopsis Sequence Match ( AT5G22060.1 )
(BLAST)

001: MFGRGPSRKS DNTKFYEILG VPKTAAPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GSGGHPFGSH SRGRRQRRGE DVVHPLKVSL EDVYLGTTKK LSLSRKALCS KCNGKGSKSG ASMKCGGCQG SGMKISIRQF GPGMMQQVQH ACNDCKGTGE
201: TINDRDRCPQ CKGEKVVSEK KVLEVNVEKG MQHNQKITFS GQADEAPDTV TGDIVFVIQQ KEHPKFKRKG EDLFVEHTIS LTEALCGFQF VLTHLDKRQL
301: LIKSKPGEVV KPDSYKAISD EGMPIYQRPF MKGKLYIHFT VEFPESLSPD QTKAIEAVLP KPTKAAISDM EIDDCEETTL HDVNIEDEMK RKAQAQREAY
401: DDDEEDHPGG AQRVQCAQQ

Arabidopsis Description

ATJ2At5g22060 [Source:UniProtKB/TrEMBL;Acc:Q0V7U1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.