CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d034368_P001	Maize	extracellular, plasma membrane	98.33	98.33
Zm00001d013111_P001	Maize	extracellular, plasma membrane	96.89	97.12
Os03t0787300-01	Rice	plasma membrane	93.06	93.29
Zm00001d006666_P001	Maize	nucleus	64.59	92.15
TraesCS5D01G434100.1	Wheat	nucleus	92.34	91.69
TraesCS5B01G428000.1	Wheat	nucleus	92.34	91.69
TraesCS5A01G426100.1	Wheat	nucleus	92.11	91.45
HORVU5Hr1G103680.1	Barley	cytosol	91.63	90.97
VIT_06s0080g01230.t01	Wine grape	cytosol	89.0	89.21
KRH25334	Soybean	nucleus	88.76	88.97
KRH22611	Soybean	nucleus	88.76	88.97
Zm00001d048538_P001	Maize	nucleus	69.14	88.92
KRG88903	Soybean	nucleus	88.28	88.49
KRH26709	Soybean	nucleus	88.04	88.25
VIT_13s0073g00560.t01	Wine grape	cytosol	87.56	87.98
Solyc04g009770.2.1	Tomato	nucleus	86.84	86.84
EER93745	Sorghum	nucleus	86.6	86.4
PGSC0003DMT400065401	Potato	nucleus	86.12	85.92
Zm00001d006230_P001	Maize	cytosol	59.33	85.52
Zm00001d045645_P001	Maize	cytosol	54.31	85.34
Zm00001d031357_P001	Maize	cytosol, nucleus, plastid	37.56	85.33
Bra002385.1-P	Field mustard	nucleus	83.49	82.7
CDX92386	Canola	nucleus	83.49	82.7
AT3G44110.1	Thale cress	nucleus	83.01	82.62
CDX92385	Canola	nucleus	83.25	82.46
Bra002386.1-P	Field mustard	nucleus	83.01	82.23
Zm00001d006563_P001	Maize	mitochondrion	53.35	81.99
CDY65546	Canola	nucleus	82.54	81.95
CDY09117	Canola	nucleus	81.58	80.61
Bra020169.1-P	Field mustard	nucleus	81.1	80.14
AT5G22060.1	Thale cress	cytosol	79.19	79.0
Bra006608.1-P	Field mustard	nucleus	74.88	76.72
CDX88812	Canola	nucleus	74.88	76.72
CDX70980	Canola	nucleus	73.44	75.43
EES07516	Sorghum	nucleus	75.6	75.24
HORVU6Hr1G065410.3	Barley	cytosol, mitochondrion	52.15	74.66
Zm00001d026185_P001	Maize	endoplasmic reticulum	89.47	74.35
Zm00001d004840_P001	Maize	mitochondrion	60.53	73.76
CDY16617	Canola	nucleus	35.65	71.63
OQU82085	Sorghum	nucleus	70.33	70.33
EES17752	Sorghum	endoplasmic reticulum, golgi	32.54	38.86
EES02163	Sorghum	cytosol	29.43	36.5
EES19943	Sorghum	cytosol	31.34	36.19
KXG32445	Sorghum	endoplasmic reticulum	29.9	36.13
EES14600	Sorghum	cytosol	29.43	35.86
EES17644	Sorghum	cytosol	26.79	35.78
KXG29372	Sorghum	cytosol	27.27	33.73
EES13688	Sorghum	cytosol	28.23	33.24
EER89093	Sorghum	mitochondrion, plastid	26.55	25.52
EES19566	Sorghum	cytosol	20.57	25.29
EES01846	Sorghum	cytosol	19.86	25.23
EES13204	Sorghum	plastid	27.03	25.22
KXG31305	Sorghum	plastid	27.99	23.54
EES15725	Sorghum	mitochondrion, plastid	22.73	22.67
KXG19604	Sorghum	mitochondrion	23.45	21.08
OQU92981	Sorghum	plastid	25.12	19.48

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A1B6QHK8	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408
GO:GO:0009628	GO:GO:0009987	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd
InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
EnsemblPlants:KXG37403	ProteinID:KXG37403	ProteinID:KXG37403.1	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43888
PANTHER:PTHR43888:SF15	SMART:SM00271	EnsemblPlantsGene:SORBI_3001G064500	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
UniParc:UPI0001C80D37	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:4879039..4882999

Molecular Weight (calculated)

46725.2 Da

IEP (calculated)

5.902

GRAVY (calculated)

-0.817

Length

418 amino acids

Sequence
(BLAST)

001: MFGRAPKKSD NTRYYEILGV SKDASQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV LSDPEKREIY DQYGEDALKE GMGGGGGMHD PFDIFQSFFG
101: GGSPFGGGGS SRGRRQRRGE DVVHPLKVSL EDLYNGTSKK LSLSRNVLCS KCNGKGSKSG ASSRCAGCQG SGFKVQIRQL GPGMIQQMQH PCNECKGSGE
201: TINDKDRCPQ CKGDKVVQEK KVLEVVVEKG MQNGQKITFP GEADEAPDTV TGDIIFVLQQ KEHPKFKRKG DDLFYEHTLT LTESLCGFQF VLTHLDNRQL
301: LIKSNPGEVV KPDSFKAIND EGMPMYQRPF MKGKLYIHFS VDFPDSLSLE QCKALEAVLP PKPVSQYTDM ELDECEETMP YDVNIEEEMR RRQQQHQEAY
401: DEDEDMPGGA QRVQCAQQ

Best Arabidopsis Sequence Match ( AT3G44110.1 )
(BLAST)

001: MFGRGPSKKS DNTKFYEILG VPKSASPEDL KKAYKKAAIK NHPDKGGDPE KFKELAQAYE VLSDPEKREI YDQYGEDALK EGMGGGGGGH DPFDIFSSFF
101: GGGPFGGNTS RQRRQRRGED VVHPLKVSLE DVYLGTMKKL SLSRNALCSK CNGKGSKSGA SLKCGGCQGS GMKVSIRQLG PGMIQQMQHA CNECKGTGET
201: INDRDRCPQC KGDKVIPEKK VLEVNVEKGM QHSQKITFEG QADEAPDTVT GDIVFVLQQK EHPKFKRKGE DLFVEHTLSL TEALCGFQFV LTHLDGRSLL
301: IKSNPGEVVK PDSYKAISDE GMPIYQRPFM KGKLYIHFTV EFPDSLSPDQ TKALEAVLPK PSTAQLSDME IDECEETTLH DVNIEDEMRR KAQAQREAYD
401: DDDEDDDHPG GAQRVQCAQQ

Arabidopsis Description

ATJ3DnaJ protein homolog atj3 [Source:UniProtKB/TrEMBL;Acc:Q0WW92]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.