CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0804500-01	Rice	plastid	84.1	85.83
TraesCS6A01G372700.1	Wheat	plastid	81.29	82.79
TraesCS6D01G356800.1	Wheat	plastid	80.68	82.51
TraesCS6B01G410600.1	Wheat	plastid	81.49	82.15
Zm00001d018413_P003	Maize	mitochondrion	93.76	81.9
Zm00001d052001_P002	Maize	plastid	92.96	75.24
HORVU0Hr1G017450.8	Barley	cytosol	71.03	72.93
GSMUA_Achr11P...	Banana	plastid	68.01	68.98
VIT_09s0002g07210.t01	Wine grape	plastid	64.79	65.85
Solyc03g116790.2.1	Tomato	plastid	64.99	64.86
KRH09715	Soybean	nucleus, plastid	62.98	63.49
AT1G80030.2	Thale cress	plastid	62.58	62.2
CDY58774	Canola	plastid	61.37	61.0
Bra035201.1-P	Field mustard	plastid	61.17	60.68
CDX87288	Canola	plastid	61.17	60.68
KRH23590	Soybean	nucleus	42.66	59.38
KRH44477	Soybean	plastid	52.92	59.23
EES13204	Sorghum	plastid	42.05	46.65
OQU92981	Sorghum	plastid	36.82	33.95
EER89093	Sorghum	mitochondrion, plastid	28.17	32.18
EES02163	Sorghum	cytosol	21.33	31.45
EES15725	Sorghum	mitochondrion, plastid	26.16	31.03
EES19943	Sorghum	cytosol	22.33	30.66
EES17644	Sorghum	cytosol	18.91	30.03
EES14600	Sorghum	cytosol	20.12	29.15
EES17752	Sorghum	endoplasmic reticulum, golgi	20.32	28.86
KXG32445	Sorghum	endoplasmic reticulum	19.92	28.61
EER93745	Sorghum	nucleus	23.94	28.4
KXG37403	Sorghum	cytosol	23.54	27.99
OQU82085	Sorghum	nucleus	23.54	27.99
EES07516	Sorghum	nucleus	23.34	27.62
EES13688	Sorghum	cytosol	19.52	27.32
KXG29372	Sorghum	cytosol	18.31	26.92
KXG19604	Sorghum	mitochondrion	24.95	26.67
EES19566	Sorghum	cytosol	14.49	21.18
EES01846	Sorghum	cytosol	13.88	20.97

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	UniProt:A0A194YTY4	InterPro:DnaJ
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020
GO:GO:0031072	GO:GO:0046872	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf
InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlants:KXG31305	ProteinID:KXG31305
ProteinID:KXG31305.1	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22	SMART:SM00271
EnsemblPlantsGene:SORBI_3004G336000	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	UniParc:UPI0003C6CA8E
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:66789418..66797931

Molecular Weight (calculated)

53031.9 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.407

Length

497 amino acids

Sequence
(BLAST)

001: MALTSMLPFA PSNTSLSYSS RASTAAAFAP RGAHFAAYGR SGGGGAQSLA CAAPRRCGRA PRRRRGGGLV VWASADYYAT LGVPRAASNK DIKAAYRKLA
101: RQYHPDVNKE PGATEKFKEI SAAYEVLSDE KKRALYDQYG EAGVKSAVGG PGGAYTTNPF DLFETFFGAS MGGFSGMDQS SFRTSRRNTA VQGEDIRYDV
201: ILGFTEAIFG TEKDIILSHL ETCDTCGGSG SKAGSKMRIC STCGGRGQVM RTEQTPFGLF SQVSICPTCA GEGEVISEYC RKCSGEGRIR VRKEIKVKIP
301: PGVSKGSTLR VRGEGDAGPK GGPPGDLFVC LDIEEPSDIR RDGINLYSTV SISYLEAILG TVKGVRTVDG TSDLRIPPGT QPGDVIVLAK QGVPSLNKPS
401: IRGDHLFTVK VAIPKRISGR ERELLEELAS LSNGGFARTD AKPKPAQPKR VHQEKEVGAS QEDTDKSKEA EGDWLKKLTD FAGSIVNGAA KWLNDNL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.