Factsheet for Os02t0804500-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 21433289
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G356800.1	Wheat	plastid	85.01	85.19
TraesCS6A01G372700.1	Wheat	plastid	85.01	84.84
TraesCS6B01G410600.1	Wheat	plastid	85.83	84.79
KXG31305	Sorghum	plastid	85.83	84.1
HORVU0Hr1G017450.8	Barley	cytosol	74.74	75.21
Zm00001d018413_P003	Maize	mitochondrion	83.98	71.88
GSMUA_Achr11P...	Banana	plastid	71.46	71.02
Zm00001d052001_P002	Maize	plastid	83.78	66.45
VIT_09s0002g07210.t01	Wine grape	plastid	65.71	65.44
KRH09715	Soybean	nucleus, plastid	63.86	63.08
Solyc03g116790.2.1	Tomato	plastid	64.48	63.05
AT1G80030.2	Thale cress	plastid	64.27	62.6
CDY58774	Canola	plastid	64.27	62.6
Bra035201.1-P	Field mustard	plastid	63.66	61.88
CDX87288	Canola	plastid	63.66	61.88
KRH23590	Soybean	nucleus	42.3	57.7
KRH44477	Soybean	plastid	52.36	57.43
Os05t0333500-01	Rice	mitochondrion, plastid	43.53	47.43
Os05t0334000-01	Rice	mitochondrion, plastid	43.53	47.43
Os05t0334400-01	Rice	mitochondrion, plastid	43.53	47.43
Os12t0168400-01	Rice	plastid	27.72	32.22
Os06t0116800-01	Rice	mitochondrion	28.95	31.9
Os05t0562300-01	Rice	nucleus	22.79	30.66
Os02t0306900-01	Rice	cytosol	21.36	29.8
Os03t0787300-01	Rice	plasma membrane	24.64	28.78
Os08t0161900-01	Rice	cytosol	19.92	28.36
Os02t0128400-01	Rice	cytosol	19.51	28.02
Os03t0648400-02	Rice	nucleus	23.82	27.82
Os02t0656500-01	Rice	nucleus	23.61	27.38
Os01t0239100-02	Rice	cytoskeleton, cytosol, nucleus	19.51	27.22
Os04t0549600-01	Rice	cytosol	23.0	26.92
Os05t0156500-01	Rice	cytosol, nucleus	7.8	26.03
Os05t0427900-01	Rice	cytosol	7.6	23.42
Os12t0619100-00	Rice	cytosol	20.53	23.26
Os01t0875700-01	Rice	cytosol	14.37	21.41
Os08t0374400-00	Rice	plastid	16.43	20.57

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	EntrezGene:4331058	ProteinID:BAD19417.1
ProteinID:BAF10348.1	ProteinID:BAS81450.1	InterPro:DnaJ	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150
GO:GO:0009408	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009628
GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0031072	GO:GO:0046872	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	HAMAP:MF_01152	EnsemblPlantsGene:Os02g0804500	EnsemblPlants:Os02t0804500-01	PFAM:PF00226	PFAM:PF00684
PFAM:PF01556	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096
PANTHER:PTHR43096:SF22	UniProt:Q6K850	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938
TIGRFAMs:TIGR02349	UniParc:UPI0000375865	RefSeq:XP_015626836.1	SEG:seg	:	:

Description

DnaJ domain protein A2, rice DJA4 homologMolecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os02t0804500-01)

Coordinates

chr2:-:34300634..34307611

Molecular Weight (calculated)

52020.7 Da

IEP (calculated)

9.188

GRAVY (calculated)

-0.401

Length

487 amino acids

Sequence
(BLAST)

001: MAFATSTLPF APSNPSPSSR SAAAAFSPRG GVHFAAARSG LPLACAAPRH RGRPPPRRRR GGCLVVWASA DYYATLGVPR SASNKDIKAA YRKLARQYHP
101: DVNKEPGATD KFKEISAAYE VLSDEKKRAL YDQYGEAGVR SAVGGSAGAY TSNPFDLFET FFGASMGGFS GMDQGTFRTR RRSTAVQGED IRYDVNLGFS
201: EAIFGTEKDI ILSHLETCDA CAGSGSKIGS KMRICSTCGG RGQVMRTEQT PFGLFSQVSI CPTCAGEGEV ISEYCKKCAG EGRVRVRKEI KVKIPPGVSK
301: GSTLRVRGEG DAGPKGGPPG DLFVCLDIEE PADIKRDGIN LYSTVSVSYI EAILGTVKKV RTVDGNSELR IPPGTQPGDV VVLAKQGVPS LNKPSVRGDH
401: LFTIKVTIPK RISGREKELL EELASLSNGG FAGAPVKPKS IRQENETTVA QENSDQPDEG EGDWLKKLQD FAGSIANGAA KWLKDNL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.