Factsheet for TraesCS6B01G410600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G356800.1	Wheat	plastid	97.77	99.18
TraesCS6A01G372700.1	Wheat	plastid	97.97	98.98
Os02t0804500-01	Rice	plastid	84.79	85.83
HORVU0Hr1G017450.8	Barley	cytosol	82.96	84.5
KXG31305	Sorghum	plastid	82.15	81.49
Zm00001d018413_P003	Maize	mitochondrion	80.53	69.77
GSMUA_Achr11P...	Banana	plastid	68.15	68.57
VIT_09s0002g07210.t01	Wine grape	plastid	64.91	65.44
Zm00001d052001_P002	Maize	plastid	79.31	63.68
Solyc03g116790.2.1	Tomato	plastid	63.29	62.65
CDY58774	Canola	plastid	63.49	62.6
KRH09715	Soybean	nucleus, plastid	62.47	62.47
AT1G80030.2	Thale cress	plastid	63.29	62.4
Bra035201.1-P	Field mustard	plastid	62.68	61.68
CDX87288	Canola	plastid	62.68	61.68
KRH23590	Soybean	nucleus	41.78	57.7
KRH44477	Soybean	plastid	51.93	57.66
TraesCS5B01G115900.1	Wheat	plastid	42.8	43.69
TraesCS4B01G241700.1	Wheat	plastid	38.95	35.89
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	25.96	30.4
TraesCS1B01G423600.1	Wheat	cytosol	22.11	28.84
TraesCS7B01G188900.2	Wheat	cytosol	19.88	28.32
TraesCS3B01G587800.1	Wheat	cytosol	18.46	28.17
TraesCS3B01G192300.1	Wheat	cytosol	19.68	28.12
TraesCS5B01G428000.1	Wheat	nucleus	23.94	28.03
TraesCS1B01G125100.1	Wheat	nucleus	19.88	28.0
TraesCS5B01G374900.1	Wheat	nucleus	23.73	27.79
TraesCS1B01G088700.1	Wheat	cytosol	19.27	27.38
TraesCS6B01G274600.1	Wheat	nucleus	22.92	26.59
TraesCS6B01G115000.1	Wheat	cytosol	18.05	26.41
TraesCS7B01G081600.2	Wheat	mitochondrion	25.36	25.99
TraesCS1B01G278300.1	Wheat	cytosol	15.01	22.63
TraesCS3B01G418500.1	Wheat	cytosol	13.39	20.31

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.4.2	Gene3D:2.10.230.10	Gene3D:2.60.260.20	InterPro:DnaJ	InterPro:DnaJ_C
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006457
GO:GO:0006950	GO:GO:0008150	GO:GO:0009408	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536
GO:GO:0009579	GO:GO:0009628	GO:GO:0009941	GO:GO:0009987	GO:GO:0016020	GO:GO:0031072
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:HSP_DnaJ_Cys-rich_dom	InterPro:HSP_DnaJ_Cys-rich_dom_sf	InterPro:IPR001305	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	HAMAP:MF_01152	PFAM:PF00226	PFAM:PF00684	PFAM:PF01556
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PFscan:PS51188	PANTHER:PTHR43096	PANTHER:PTHR43096:SF22
SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	SUPFAM:SSF57938	TIGRFAMs:TIGR02349	EnsemblPlantsGene:TraesCS6B01G410600
EnsemblPlants:TraesCS6B01G410600.1	TIGR:cd06257	TIGR:cd10719	TIGR:cd10747	SEG:seg	:

Description

No Description!

Coordinates

chr6B:-:684505008..684512695

Molecular Weight (calculated)

52240.1 Da

IEP (calculated)

9.590

GRAVY (calculated)

-0.369

Length

493 amino acids

Sequence
(BLAST)

001: MALALSTLPF APSTPAPASR GSAAFRPRGA HFAPSPAGRS GGLGVGLPLA CAAPRKNRGR RRRGGGLVVF AAADYYATLG VQRSATIKDI KAAYRKLARQ
101: YHPDVNKEPG ATDKFKEISS AYEVLSDDKK RALYDQYGEA GVKSAVGGNA GAYTSNPFDL FETFFGASMG GGGGFSGMDQ SAFRTRRRST AAQGEDIRYD
201: VILGFSEAIF GTEKDIILSH LETCDACSGS GSKVGSKAKI CSTCGGRGQV MRTEQTPFGL FSQVSSCPTC VGEGEVISEY CRKCSGEGRV RVRKEIKVKI
301: PPGVSKGSTL RVRGEGDAGP KGGPPGDLFV CLDVEEPSDI KRDGINLYST VSISYIEAIL GTVEKVRTVE GSSELRIPPG TQPGDVLVLA KQGVPSLNRP
401: SIRGDHLFTV KVSIPKRISG REKELLEELA SLKNGGFARA PVKPKPVHKE NGSRAAPEVS DQPDDGEGDW LKKLSDFAGS IVNGASKWLK DNL

Best Arabidopsis Sequence Match ( AT1G80030.1 )
(BLAST)

001: MAALASPSLI PSSLCFAAAA DGPRSLSSNF SAFSDGGSNF RYHKSFLSLS SSSSSSTPYR NRRGRSLVVF ATSGDYYATL GVSKSANNKE IKAAYRRLAR
101: QYHPDVNKEP GATEKFKEIS AAYEVLSDEQ KRALYDQYGE AGVKSTVGGA SGPYTSNPFD LFETFFGASM GGFPGMDQAD FGRTRRSRVT KGEDLRYDIT
201: LELSEAIFGS EKEFDLTHLE TCEACAGTGA KAGSKMRICS TCGGRGQVMR TEQTPFGMFS QVSICPNCGG DGEVISENCR KCSGEGRVRI KKSIKVKIPP
301: GVSAGSILRV AGEGDSGPRG GPPGDLYVYL DVEDVRGIER DGINLLSTLS ISYLDAILGA VVKVKTVEGD TELQIPPGTQ PGDVLVLAKK GVPKLNRPSI
401: RGDHLFTVKV SVPNQISAGE RELLEELASL KDTSSNRSRT RAKPQQPSTL STAPSGSENK KDEVKEENEE PEQENYLWNN IKEFAGSVAN GALKWLRDNL

Arabidopsis Description

Molecular chaperone Hsp40/DnaJ family protein [Source:UniProtKB/TrEMBL;Acc:Q0WN54]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.