Factsheet for TraesCS1B01G278300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G267600.1	Wheat	cytosol	98.17	98.17
TraesCS1D01G267500.1	Wheat	cytosol	98.17	96.98
Os05t0427900-01	Rice	cytosol	37.92	78.48
EES19566	Sorghum	cytosol	69.11	66.47
TraesCS3B01G418500.1	Wheat	cytosol	65.75	66.15
Zm00001d038250_P001	Maize	cytosol	66.36	64.78
GSMUA_Achr7P03030_001	Banana	cytosol	55.96	57.55
HORVU0Hr1G000620.4	Barley	plastid	53.21	44.05
GSMUA_Achr8P32540_001	Banana	mitochondrion	33.03	38.85
Solyc11g044450.1.1	Tomato	nucleus	37.92	36.05
PGSC0003DMT400062759	Potato	cytosol	37.61	35.45
TraesCS3B01G587800.1	Wheat	cytosol	32.42	32.82
KRH10414	Soybean	cytosol	37.61	32.28
KRH44054	Soybean	cytosol	37.31	31.77
TraesCS1B01G423600.1	Wheat	cytosol	36.7	31.75
TraesCS3B01G192300.1	Wheat	cytosol	33.33	31.59
VIT_12s0034g02190.t01	Wine grape	nucleus	33.03	31.49
CDY66166	Canola	plastid	33.33	31.32
TraesCS7B01G188900.2	Wheat	cytosol	33.03	31.21
TraesCS6B01G115000.1	Wheat	cytosol	32.11	31.16
CDY14974	Canola	nucleus	32.72	30.92
Bra036942.1-P	Field mustard	nucleus	32.72	30.66
AT1G44160.1	Thale cress	mitochondrion	33.33	30.53
TraesCS1B01G088700.1	Wheat	cytosol	32.11	30.26
KRH64663	Soybean	plastid	32.11	29.66
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	32.72	29.56
CDY20589	Canola	nucleus	34.56	28.75
Solyc06g060240.1.1	Tomato	cytosol	33.33	28.39
Bra018413.1-P	Field mustard	nucleus	34.86	28.36
CDY20977	Canola	nucleus	34.86	28.29
PGSC0003DMT400045241	Potato	extracellular, mitochondrion	32.42	27.53
CDX97927	Canola	nucleus	35.47	26.79
CDY67277	Canola	cytosol, nucleus, plastid	35.47	26.67
Bra019886.1-P	Field mustard	nucleus	35.17	26.56
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	34.56	25.8
KRG90292	Soybean	cytosol, nucleus, plastid	22.32	25.52
TraesCS1B01G125100.1	Wheat	nucleus	21.71	20.29
TraesCS6B01G274600.1	Wheat	nucleus	25.99	20.0
TraesCS5B01G428000.1	Wheat	nucleus	24.46	19.0
TraesCS5B01G374900.1	Wheat	nucleus	23.55	18.29
TraesCS5B01G117900.1	Wheat	mitochondrion, plastid	20.18	15.68
TraesCS6B01G410600.1	Wheat	plastid	22.63	15.01
TraesCS5B01G115900.1	Wheat	plastid	20.8	14.08
TraesCS7B01G081600.2	Wheat	mitochondrion	18.65	12.68
TraesCS4B01G241700.1	Wheat	plastid	19.57	11.96

Protein Annotations

Gene3D:1.10.287.110	Gene3D:2.60.260.20	MapMan:35.1	ncoils:Coil	InterPro:DnaJ_C	InterPro:DnaJ_domain
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987
GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226
PFAM:PF01556	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF517	SMART:SM00271
SUPFAM:SSF46565	SUPFAM:SSF49493	EnsemblPlantsGene:TraesCS1B01G278300	EnsemblPlants:TraesCS1B01G278300.1	TIGR:cd06257	TIGR:cd10747
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:486777274..486779538

Molecular Weight (calculated)

36325.7 Da

IEP (calculated)

10.362

GRAVY (calculated)

-0.597

Length

327 amino acids

Sequence
(BLAST)

001: MGNPPELYYQ LLNITRDTPP QEIRAAYRCL VRQWHPDKHP PSSKSEAEDR FKAITQAYEA LLDQQENRAV LRARNADEGR RSCARPEERV GGSAAAMARA
101: PERAARTTAP PPPARESQKV YSSTDIGGGG RRAFAEFSSY VVRKAPPLER KVECTLEELC AGCKKEVKYT RDVVTKNGLI AKKEVTQIIR VKPGWKKGTK
201: VTFEGMGNER PGCLPGDAVF TVSARRHKAF KRQGDDLVLK AEVPLVSALT GWSFSFRLLG GEKVSWSFRD EVIRPGYEKV VRGEGMPVVG GKKGARGDLR
301: VKFDVVFPKN LTGEQRRGLV EILRGCA

Best Arabidopsis Sequence Match ( AT1G11040.1 )
(BLAST)

001: MGTPRSPATD FFGISKTACK AYKSLVTKLH PLSSHRKSES HSDADSAIHR RYLEEKFAEE DDLIAARRGL RLQSMDDSSV FKRRSSLLSN SSSRRSHTPQ
101: ARPTYLSSSA SSNRRSAFSR STSRRDEGSS HSGVRSHGLK SRPISNNTSP MTSPFTSPRG KDQTLGDLFG SVKKLSSPTS NSPINGVKQS SPSSISKSAS
201: KRDKDERGST SSATSTSLPY SKSKSTRDTA GSIAKSISRR STTPIVFSQS TPPKKPPAVE KKLECTLEEL CHGGVKNIKI KRDIITDEGL IMQQEEMLRV
301: NIQPGWKKGT KITFEGVGNE KPGYLPEDIT FVVEEKRHPL FKRRGDDLEI AVEIPLLKAL TGCKLSVPLL SGESMSITVG DVIFHGFEKA IKGQGMPNAK
401: EEGKRGDLRI TFLVNFPEKL SEEQRSMAYE VLKDCSWA

Arabidopsis Description

DNAJ chaperone C-terminal domain-containing protein [Source:UniProtKB/TrEMBL;Acc:O04087]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.