Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G059600.1 | Wheat | cytosol | 94.74 | 95.92 |
| TraesCS3A01G520100.1 | Wheat | cytosol | 78.02 | 94.38 |
| HORVU3Hr1G113710.2 | Barley | plastid | 78.33 | 74.63 |
| EES13688 | Sorghum | cytosol | 76.78 | 69.86 |
| Zm00001d032347_P001 | Maize | cytosol | 71.21 | 67.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.49 | 58.86 |
| PGSC0003DMT400083824 | Potato | cytosol | 55.42 | 55.25 |
| KRH61857 | Soybean | cytosol, nucleus | 19.5 | 54.31 |
| KRH52529 | Soybean | cytosol | 54.8 | 54.29 |
| Os08t0374400-00 | Rice | plastid | 65.33 | 54.24 |
| Bra020505.1-P | Field mustard | cytosol | 55.73 | 54.05 |
| CDY05498 | Canola | cytosol | 55.73 | 54.05 |
| CDY54902 | Canola | cytosol | 55.73 | 54.05 |
| CDX88188 | Canola | cytosol | 53.56 | 53.89 |
| Bra009848.1-P | Field mustard | cytosol | 52.63 | 53.8 |
| CDX80523 | Canola | cytosol | 53.25 | 53.58 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 54.18 | 51.62 |
| AT5G25530.1 | Thale cress | cytosol | 55.11 | 51.3 |
| TraesCS7B01G188900.2 | Wheat | cytosol | 52.32 | 48.84 |
| TraesCS3B01G192300.1 | Wheat | cytosol | 50.15 | 46.96 |
| KRH61858 | Soybean | cytosol | 20.12 | 45.77 |
| TraesCS6B01G115000.1 | Wheat | cytosol | 47.37 | 45.4 |
| TraesCS1B01G423600.1 | Wheat | cytosol | 52.63 | 44.97 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 43.96 | 40.92 |
| TraesCS1B01G278300.1 | Wheat | cytosol | 32.82 | 32.42 |
| TraesCS3B01G418500.1 | Wheat | cytosol | 31.89 | 31.69 |
| TraesCS5B01G428000.1 | Wheat | nucleus | 34.67 | 26.6 |
| TraesCS1B01G125100.1 | Wheat | nucleus | 28.79 | 26.57 |
| TraesCS5B01G374900.1 | Wheat | nucleus | 32.2 | 24.7 |
| TraesCS6B01G274600.1 | Wheat | nucleus | 32.2 | 24.47 |
| TraesCS5B01G115900.1 | Wheat | plastid | 28.79 | 19.25 |
| TraesCS6B01G410600.1 | Wheat | plastid | 28.17 | 18.46 |
| TraesCS5B01G117900.1 | Wheat | mitochondrion, plastid | 22.29 | 17.1 |
| TraesCS4B01G241700.1 | Wheat | plastid | 26.32 | 15.89 |
| TraesCS7B01G081600.2 | Wheat | mitochondrion | 21.98 | 14.76 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF218 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | EnsemblPlantsGene:TraesCS3B01G587800 | EnsemblPlants:TraesCS3B01G587800.1 | TIGR:cd06257 |
| TIGR:cd10747 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:814013180..814015424
Molecular Weight (calculated)
35909.6 Da
IEP (calculated)
5.903
GRAVY (calculated)
-0.640
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVDYYEIL NVDRSATDDD LRRAYRRLAM RWHLDKNPAG DKDSEAKFKD ITQAYNVLSD ASKRAVYDQY GEEGLKGPPQ QPVDDDIFAE FFGSTPFTYC
101: NNARGRQRTA CDGGGLGRPY GARDQGGGAP PPPVETKLAC TLEELYTGVT KNMKISRNVV DSSGRMKTES EVLSIEVKPG WKKGTKITFP GKGNQQWNQP
201: PADLVFAIDE RPHHMYRRDG KDLVTDVRLT LAEALGTVIV LPTLDGRELA VDVGGGQEEE APMVRPGYEL VVPMEGMPIA REPGRRGSLR IRFDVMFPDR
301: LKRDTRLQIK RILEADAASS LDA
101: NNARGRQRTA CDGGGLGRPY GARDQGGGAP PPPVETKLAC TLEELYTGVT KNMKISRNVV DSSGRMKTES EVLSIEVKPG WKKGTKITFP GKGNQQWNQP
201: PADLVFAIDE RPHHMYRRDG KDLVTDVRLT LAEALGTVIV LPTLDGRELA VDVGGGQEEE APMVRPGYEL VVPMEGMPIA REPGRRGSLR IRFDVMFPDR
301: LKRDTRLQIK RILEADAASS LDA
001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.