Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05498 | Canola | cytosol | 87.61 | 91.29 |
| Bra020505.1-P | Field mustard | cytosol | 87.61 | 91.29 |
| CDY54902 | Canola | cytosol | 87.32 | 90.99 |
| CDX88188 | Canola | cytosol | 83.57 | 90.34 |
| Bra009848.1-P | Field mustard | cytosol | 82.13 | 90.19 |
| CDX80523 | Canola | cytosol | 82.71 | 89.41 |
| KRH61858 | Soybean | cytosol | 32.85 | 80.28 |
| KRH52529 | Soybean | cytosol | 71.47 | 76.07 |
| PGSC0003DMT400083824 | Potato | cytosol | 70.03 | 75.0 |
| VIT_04s0008g04300.t01 | Wine grape | cytosol | 70.32 | 71.98 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.96 | 71.91 |
| KRH61857 | Soybean | cytosol, nucleus | 22.48 | 67.24 |
| EES14600 | Sorghum | cytosol | 63.4 | 64.14 |
| Zm00001d024527_P001 | Maize | cytosol | 63.11 | 62.93 |
| Os08t0161900-01 | Rice | cytosol | 61.67 | 62.57 |
| GSMUA_Achr4P12330_001 | Banana | nucleus | 58.79 | 62.2 |
| TraesCS7B01G188900.2 | Wheat | cytosol | 61.96 | 62.14 |
| TraesCS7D01G293900.1 | Wheat | cytosol | 61.96 | 62.14 |
| TraesCS7A01G298000.1 | Wheat | cytosol | 61.96 | 62.14 |
| HORVU7Hr1G070170.1 | Barley | cytosol | 61.38 | 61.56 |
| GSMUA_Achr9P23300_001 | Banana | cytosol | 60.52 | 61.05 |
| AT3G08910.1 | Thale cress | nucleus | 55.04 | 59.13 |
| AT2G20560.1 | Thale cress | cytosol | 57.35 | 59.05 |
| TraesCS3A01G520100.1 | Wheat | cytosol | 44.09 | 57.3 |
| GSMUA_AchrUn_... | Banana | cytosol | 53.31 | 57.28 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 57.35 | 57.18 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 53.89 | 56.5 |
| TraesCSU01G059600.1 | Wheat | cytosol | 51.59 | 56.11 |
| EES13688 | Sorghum | cytosol | 56.48 | 55.21 |
| TraesCS3B01G587800.1 | Wheat | cytosol | 51.3 | 55.11 |
| Zm00001d032347_P001 | Maize | cytosol | 53.6 | 54.55 |
| AT5G01390.1 | Thale cress | cytosol | 52.16 | 54.03 |
| AT1G10350.1 | Thale cress | cytosol | 53.89 | 53.58 |
| TraesCS6B01G115000.1 | Wheat | cytosol | 51.01 | 52.52 |
| AT3G47940.1 | Thale cress | cytosol | 52.74 | 52.29 |
| TraesCS6A01G087000.1 | Wheat | cytosol | 50.72 | 52.23 |
| TraesCSU01G019500.1 | Wheat | nucleus | 50.72 | 52.23 |
| Os02t0128400-01 | Rice | cytosol | 50.72 | 51.92 |
| KXG29372 | Sorghum | cytosol | 50.43 | 51.78 |
| HORVU6Hr1G016170.1 | Barley | cytosol | 50.14 | 51.63 |
| HORVU6Hr1G016080.3 | Barley | cytosol | 50.14 | 50.88 |
| HORVU3Hr1G113710.2 | Barley | plastid | 42.65 | 43.66 |
| Os08t0374400-00 | Rice | plastid | 48.41 | 43.19 |
| AT2G20550.2 | Thale cress | cytosol | 35.16 | 42.96 |
| Zm00001d053972_P001 | Maize | cytosol, golgi, plasma membrane | 50.72 | 41.51 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 32.28 | 32.37 |
| AT1G44160.1 | Thale cress | mitochondrion | 29.97 | 29.13 |
| AT5G22060.1 | Thale cress | cytosol | 33.14 | 27.45 |
| AT3G44110.1 | Thale cress | nucleus | 32.85 | 27.14 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 29.97 | 23.74 |
| AT2G22360.1 | Thale cress | plastid | 26.8 | 21.04 |
| AT4G39960.1 | Thale cress | mitochondrion, plastid | 26.8 | 20.81 |
| AT5G48030.1 | Thale cress | mitochondrion | 25.07 | 19.08 |
| AT3G17830.1 | Thale cress | plastid | 28.24 | 18.96 |
| AT1G80030.2 | Thale cress | plastid | 27.09 | 18.8 |
| AT1G28210.2 | Thale cress | mitochondrion | 22.77 | 18.5 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.20.25.170 | Gene3D:2.60.260.20 | EntrezGene:832628 | UniProt:A0A178US71 |
| ProteinID:AED93459.1 | ArrayExpress:AT5G25530 | EnsemblPlantsGene:AT5G25530 | RefSeq:AT5G25530 | TAIR:AT5G25530 | RefSeq:AT5G25530-TAIR-G |
| EnsemblPlants:AT5G25530.1 | TAIR:AT5G25530.1 | Unigene:At.54999 | InterPro:DnaJ_C | InterPro:DnaJ_domain | UniProt:F4JY55 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_197935.1 |
| ProteinID:OAO95762.1 | PFAM:PF00226 | PFAM:PF01556 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00625 |
| PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF435 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 |
| UniParc:UPI000016259E | SEG:seg | : | : | : | : |
Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:F4JY55]
Coordinates
chr5:-:8889665..8890974
Molecular Weight (calculated)
37941.9 Da
IEP (calculated)
8.787
GRAVY (calculated)
-0.643
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLDYYDILK VNRNATEDDL KKSYRKLAMK WHPDKNPNTK TEAEAKFKQI SEAYEAKYEV MFQVLSDPQK RAVYDQYGEE GLSDMPPPGS TGNNGRAGGF
101: NPRNAEDIFA EFFGSSPFGF GSAGGPGRSM RFQSDGGGGM FGGFGGGNNG SENNIFRTYS EGTPAPKKPP PVESKLPCSL EELYSGSTRK MKISRSIVDA
201: NGRQAQETEI LTIVVKPGWK KGTKIKFPDK GNEQVNQLPA DLVFVIDEKP HDLFTRDGND LITSRRVTLA EAIGGTTVNI NTLDGRNLPV GVAEIVSPGY
301: EFVVPGEGMP IAKEPRNKGD LKIKFDVQFP ARLTTEQKSA LKRVLAG
101: NPRNAEDIFA EFFGSSPFGF GSAGGPGRSM RFQSDGGGGM FGGFGGGNNG SENNIFRTYS EGTPAPKKPP PVESKLPCSL EELYSGSTRK MKISRSIVDA
201: NGRQAQETEI LTIVVKPGWK KGTKIKFPDK GNEQVNQLPA DLVFVIDEKP HDLFTRDGND LITSRRVTLA EAIGGTTVNI NTLDGRNLPV GVAEIVSPGY
301: EFVVPGEGMP IAKEPRNKGD LKIKFDVQFP ARLTTEQKSA LKRVLAG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.