Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36915 | Canola | cytosol | 80.57 | 84.43 |
| Bra018099.1-P | Field mustard | cytosol | 80.29 | 84.13 |
| Bra033783.1-P | Field mustard | cytosol | 77.43 | 83.38 |
| CDX68447 | Canola | cytosol | 81.71 | 83.38 |
| CDX83026 | Canola | cytosol | 78.0 | 83.23 |
| Bra019519.1-P | Field mustard | cytosol | 78.86 | 83.13 |
| CDY21803 | Canola | nucleus | 77.14 | 79.88 |
| CDY24146 | Canola | cytosol | 79.43 | 73.74 |
| KRH63415 | Soybean | cytosol | 30.29 | 72.11 |
| KRH54495 | Soybean | nucleus | 68.0 | 67.81 |
| PGSC0003DMT400083040 | Potato | cytosol | 64.57 | 67.06 |
| Solyc06g071110.2.1 | Tomato | nucleus | 63.14 | 65.58 |
| VIT_17s0000g05530.t01 | Wine grape | cytoskeleton, cytosol, nucleus | 64.29 | 64.47 |
| KRH63417 | Soybean | nucleus | 37.14 | 64.04 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 54.57 | 57.7 |
| AT3G08910.1 | Thale cress | nucleus | 52.86 | 57.28 |
| AT1G10350.1 | Thale cress | cytosol | 56.0 | 56.16 |
| AT2G20560.1 | Thale cress | cytosol | 53.43 | 55.49 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 54.0 | 54.31 |
| AT5G01390.1 | Thale cress | cytosol | 51.43 | 53.73 |
| AT5G25530.1 | Thale cress | cytosol | 52.29 | 52.74 |
| AT2G20550.2 | Thale cress | cytosol | 34.86 | 42.96 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 30.57 | 30.92 |
| AT3G44110.1 | Thale cress | nucleus | 34.86 | 29.05 |
| AT5G22060.1 | Thale cress | cytosol | 34.29 | 28.64 |
| AT1G44160.1 | Thale cress | mitochondrion | 26.0 | 25.49 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 30.86 | 24.66 |
| AT2G22360.1 | Thale cress | plastid | 25.43 | 20.14 |
| AT4G39960.1 | Thale cress | mitochondrion, plastid | 25.43 | 19.91 |
| AT1G80030.2 | Thale cress | plastid | 28.0 | 19.6 |
| AT5G48030.1 | Thale cress | mitochondrion | 23.71 | 18.2 |
| AT1G28210.2 | Thale cress | mitochondrion | 21.14 | 17.33 |
| AT3G17830.1 | Thale cress | plastid | 24.29 | 16.44 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | EntrezGene:823949 | UniProt:A0A178V9I2 | ProteinID:AEE78349.1 |
| ArrayExpress:AT3G47940 | EnsemblPlantsGene:AT3G47940 | RefSeq:AT3G47940 | TAIR:AT3G47940 | RefSeq:AT3G47940-TAIR-G | EnsemblPlants:AT3G47940.1 |
| TAIR:AT3G47940.1 | EMBL:AY136346 | EMBL:BT000189 | ProteinID:CAB41145.1 | InterPro:DnaJ_C | InterPro:DnaJ_domain |
| InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| RefSeq:NP_190377.1 | ProteinID:OAP02957.1 | PFAM:PF00226 | PFAM:PF01556 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 |
| PANTHER:PTHR24078:SF524 | UniProt:Q9SU57 | SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | UniParc:UPI00000AC29B |
| SEG:seg | : | : | : | : | : |
Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SU57]
Coordinates
chr3:-:17687885..17689743
Molecular Weight (calculated)
39029.5 Da
IEP (calculated)
9.699
GRAVY (calculated)
-0.704
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDYYNILK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSSEASS SSSSSSSRYP
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.