Factsheet for AT1G59725.1

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45143	Canola	cytoskeleton, cytosol, nucleus	84.89	84.89
CDY30900	Canola	cytoskeleton, cytosol, nucleus	86.1	84.57
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	86.1	83.82
AT1G10350.1	Thale cress	cytosol	79.46	75.36
PGSC0003DMT400045398	Potato	mitochondrion	60.12	63.99
Solyc05g006820.2.1	Tomato	plastid	60.12	63.99
KRH69388	Soybean	cytosol	52.87	63.41
PGSC0003DMT400007444	Potato	cytosol	58.91	62.9
KRH74747	Soybean	cytosol	52.27	62.45
VIT_01s0026g01450.t01	Wine grape	cytosol	51.06	61.9
Solyc04g005820.2.1	Tomato	cytosol, nucleus	59.21	61.25
KRH45833	Soybean	cytosol	51.96	59.52
KRG99186	Soybean	cytosol	51.36	58.82
AT2G20560.1	Thale cress	cytosol	59.21	58.16
AT3G08910.1	Thale cress	nucleus	55.59	56.97
AT5G01390.1	Thale cress	cytosol	55.89	55.22
AT4G28480.1	Thale cress	cytoskeleton, cytosol, nucleus	57.4	54.6
AT3G47940.1	Thale cress	cytosol	57.7	54.57
AT5G25530.1	Thale cress	cytosol	56.5	53.89
KRH60063	Soybean	endoplasmic reticulum, golgi	29.91	50.0
AT2G20550.2	Thale cress	cytosol	38.07	44.37
AT3G62600.1	Thale cress	endoplasmic reticulum, golgi	33.53	32.08
AT1G44160.1	Thale cress	mitochondrion	32.02	29.69
AT3G44110.1	Thale cress	nucleus	35.35	27.86
AT5G22060.1	Thale cress	cytosol	34.44	27.21
AT1G11040.1	Thale cress	cytosol, nucleus, plastid	32.02	24.2
AT2G22360.1	Thale cress	plastid	28.1	21.04
AT4G39960.1	Thale cress	mitochondrion, plastid	27.79	20.58
AT1G80030.2	Thale cress	plastid	29.91	19.8
AT5G48030.1	Thale cress	mitochondrion	25.98	18.86
AT1G28210.2	Thale cress	mitochondrion	24.17	18.74
AT3G17830.1	Thale cress	plastid	28.4	18.18

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EntrezGene:842265	UniProt:A0A178WGX9	ProteinID:AAD39315.1
ProteinID:AEE33609.1	ArrayExpress:AT1G59725	EnsemblPlantsGene:AT1G59725	RefSeq:AT1G59725	TAIR:AT1G59725	RefSeq:AT1G59725-TAIR-G
EnsemblPlants:AT1G59725.1	TAIR:AT1G59725.1	InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082
InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	RefSeq:NP_176181.1	ProteinID:OAP17590.1
PFAM:PF00226	PFAM:PF01556	PO:PO:0009005	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF175	UniProt:Q9XIF5	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493
UniParc:UPI00000AA87C	SEG:seg	:	:	:	:

Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9XIF5]

Coordinates

chr1:+:21950503..21952491

Molecular Weight (calculated)

36614.4 Da

IEP (calculated)

8.848

GRAVY (calculated)

-0.651

Length

331 amino acids

Sequence
(BLAST)

001: MGVDYYNVLN VNPSATEDDL KKSYRRLAMK WHPDKNPTSI KQEAEAKFKQ ISEAYDVLSD PNKRQIYDQY GEDGLTATEA TASSQQHNYS SGNNNNYNAG
101: FRYYPRDAED IFAEFFGASE KVFDGGVGGG GRFKSAEAGS QTNRKTPVNR KAPAIESKLA CTLEELYKGG RRKMKISRVV PDGLGKSKPV EEILKIDITP
201: GWKKGTKITF PEKGNQEPGV TPADLIFVID EKPHSVYKRD GNDLIVDKKV SLLEALTGIT LSLTTLDGRN LTIPVLDIVK PGQEIVIPSE GMPISKEGSK
301: RGDLRINFEI CFPSRLTSEQ KTDLKRVLGG S

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.