Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G08910.1 | Thale cress | nucleus | 80.3 | 83.28 |
| KRG88624 | Soybean | nucleus | 76.42 | 75.96 |
| KRH65726 | Soybean | nucleus | 76.12 | 75.67 |
| PGSC0003DMT400059397 | Potato | cytosol | 76.42 | 75.29 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 76.42 | 75.29 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 75.22 | 74.56 |
| KRH75968 | Soybean | nucleus | 74.93 | 74.48 |
| AT2G20560.1 | Thale cress | cytosol | 66.87 | 66.47 |
| AT4G28480.1 | Thale cress | cytoskeleton, cytosol, nucleus | 68.66 | 66.09 |
| Zm00001d010958_P001 | Maize | cytosol | 62.69 | 64.42 |
| EES17644 | Sorghum | cytosol | 60.0 | 64.22 |
| TraesCS1A01G070300.1 | Wheat | cytosol | 60.3 | 59.59 |
| TraesCS1D01G072800.1 | Wheat | nucleus | 60.0 | 58.43 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 60.3 | 58.21 |
| AT1G59725.1 | Thale cress | cytoskeleton, cytosol, nucleus | 55.22 | 55.89 |
| AT1G10350.1 | Thale cress | cytosol | 56.42 | 54.15 |
| HORVU1Hr1G015040.2 | Barley | plastid | 59.7 | 52.22 |
| AT5G25530.1 | Thale cress | cytosol | 54.03 | 52.16 |
| AT3G47940.1 | Thale cress | cytosol | 53.73 | 51.43 |
| AT2G20550.2 | Thale cress | cytosol | 42.69 | 50.35 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 64.48 | 48.87 |
| HORVU1Hr1G015060.2 | Barley | plastid | 30.75 | 36.14 |
| AT3G62600.1 | Thale cress | endoplasmic reticulum, golgi | 34.93 | 33.81 |
| AT1G44160.1 | Thale cress | mitochondrion | 31.34 | 29.41 |
| AT3G44110.1 | Thale cress | nucleus | 35.22 | 28.1 |
| AT5G22060.1 | Thale cress | cytosol | 34.63 | 27.68 |
| AT1G11040.1 | Thale cress | cytosol, nucleus, plastid | 31.64 | 24.2 |
| AT4G39960.1 | Thale cress | mitochondrion, plastid | 28.96 | 21.7 |
| AT2G22360.1 | Thale cress | plastid | 28.06 | 21.27 |
| AT5G48030.1 | Thale cress | mitochondrion | 25.97 | 19.08 |
| AT1G80030.2 | Thale cress | plastid | 28.36 | 19.0 |
| AT1G28210.2 | Thale cress | mitochondrion | 23.58 | 18.5 |
| AT3G17830.1 | Thale cress | plastid | 27.76 | 17.99 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | EntrezGene:831415 | UniProt:A0A178UIH3 | ProteinID:AED90335.1 |
| EMBL:AK119010 | ArrayExpress:AT5G01390 | EnsemblPlantsGene:AT5G01390 | RefSeq:AT5G01390 | TAIR:AT5G01390 | RefSeq:AT5G01390-TAIR-G |
| EnsemblPlants:AT5G01390.1 | TAIR:AT5G01390.1 | EMBL:AY084667 | Unigene:At.33559 | EMBL:BT005582 | ProteinID:CAB81922.1 |
| InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | RefSeq:NP_195759.1 | ProteinID:OAO92872.1 | PFAM:PF00226 | PFAM:PF01556 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00625 | ScanProsite:PS00636 |
| PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 | UniProt:Q9M034 | SMART:SM00271 | SUPFAM:SSF46565 |
| SUPFAM:SSF49493 | UniParc:UPI000000C6BC | SEG:seg | : | : | : |
Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9M034]
Coordinates
chr5:-:160158..162340
Molecular Weight (calculated)
36972.9 Da
IEP (calculated)
9.588
GRAVY (calculated)
-0.595
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVDFYKVLE VDRSANDDEL KKAYRKLAMK WHPDKNPNNK KEAEAKFKQI SEAYDVLSDP QKRAIYEQYG EEGLNQAPPP GAGGGYPGGS DAGASFRFNP
101: RSADDIFSEF FGFTRPSFGT GSDSRAGPSG FRYGDDIFAS FRAATTGGEA SIPSRKSAPI ERQLPCSLED LYKGVSKKMK ISRDVLDSSG RPTPVEEILT
201: IEIKPGWKKG TKITFLEKGN EHRGVIPSDL VFIVDEKPHP VFKRDGNDLV VMQKISLVDA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP
301: KDPSRKGNLR IRFIIKFPSK LTTEQKSGIK RMLSP
101: RSADDIFSEF FGFTRPSFGT GSDSRAGPSG FRYGDDIFAS FRAATTGGEA SIPSRKSAPI ERQLPCSLED LYKGVSKKMK ISRDVLDSSG RPTPVEEILT
201: IEIKPGWKKG TKITFLEKGN EHRGVIPSDL VFIVDEKPHP VFKRDGNDLV VMQKISLVDA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP
301: KDPSRKGNLR IRFIIKFPSK LTTEQKSGIK RMLSP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.