Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G070300.1 | Wheat | cytosol | 97.09 | 98.53 |
| TraesCS1B01G088700.1 | Wheat | cytosol | 98.55 | 97.69 |
| EES17644 | Sorghum | cytosol | 70.64 | 77.64 |
| Zm00001d010958_P001 | Maize | cytosol | 73.55 | 77.61 |
| KRH00241 | Soybean | cytosol, nucleus | 60.76 | 61.65 |
| AT3G08910.1 | Thale cress | nucleus | 57.85 | 61.61 |
| KRG88624 | Soybean | nucleus | 60.17 | 61.42 |
| CDY58657 | Canola | cytosol | 58.14 | 61.35 |
| CDY64940 | Canola | nucleus | 58.43 | 61.28 |
| Bra029729.1-P | Field mustard | nucleus | 58.43 | 61.28 |
| KRH65726 | Soybean | nucleus | 59.88 | 61.13 |
| CDY07893 | Canola | cytosol | 57.27 | 60.99 |
| Bra040063.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 57.27 | 60.43 |
| CDY27963 | Canola | cytosol | 57.56 | 60.18 |
| CDY68815 | Canola | cytoskeleton, cytosol, nucleus | 58.43 | 60.18 |
| Bra001337.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 58.43 | 60.18 |
| AT5G01390.1 | Thale cress | cytosol | 58.43 | 60.0 |
| KRH75968 | Soybean | nucleus | 58.43 | 59.64 |
| VIT_08s0105g00350.t01 | Wine grape | cytosol | 58.43 | 59.47 |
| KRH49388 | Soybean | cytosol | 59.59 | 59.25 |
| CDY22173 | Canola | cytosol | 57.85 | 59.23 |
| PGSC0003DMT400059397 | Potato | cytosol | 58.43 | 59.12 |
| Solyc09g005350.2.1 | Tomato | nucleus, plastid | 58.43 | 59.12 |
| TraesCS3D01G168500.1 | Wheat | cytosol | 55.23 | 55.07 |
| TraesCS1D01G403500.1 | Wheat | cytosol | 55.81 | 53.19 |
| HORVU1Hr1G015060.2 | Barley | plastid | 39.83 | 48.07 |
| GSMUA_Achr6P15600_001 | Banana | cytosol | 61.63 | 47.96 |
| TraesCS7D01G293900.1 | Wheat | cytosol | 45.64 | 45.38 |
| TraesCS1D01G107200.1 | Wheat | nucleus | 33.14 | 32.57 |
| TraesCS1D01G267500.1 | Wheat | cytosol | 30.52 | 31.72 |
| TraesCS3D01G379400.1 | Wheat | cytosol | 29.65 | 31.38 |
| TraesCS5D01G382400.1 | Wheat | plastid | 33.72 | 27.55 |
| TraesCS5D01G434100.1 | Wheat | nucleus | 33.14 | 27.08 |
| TraesCS6D01G232600.1 | Wheat | nucleus | 33.43 | 27.06 |
| TraesCS7D01G045900.2 | Wheat | mitochondrion | 22.97 | 19.8 |
| TraesCS5D01G129700.1 | Wheat | mitochondrion, plastid | 23.84 | 19.48 |
| TraesCS6D01G356800.1 | Wheat | plastid | 27.33 | 19.34 |
| TraesCS7D01G177900.1 | Wheat | mitochondrion | 25.0 | 17.95 |
| TraesCS5D01G125500.1 | Wheat | nucleus | 27.03 | 17.29 |
| TraesCS4D01G241300.2 | Wheat | plastid | 26.16 | 16.67 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:19.1.5.2 | Gene3D:2.60.260.20 | InterPro:DnaJ_C | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 |
| GO:GO:0051082 | InterPro:HSP40/DnaJ_pept-bd | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | PFAM:PF00226 |
| PFAM:PF01556 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR24078 | PANTHER:PTHR24078:SF298 |
| SMART:SM00271 | SUPFAM:SSF46565 | SUPFAM:SSF49493 | EnsemblPlantsGene:TraesCS1D01G072800 | EnsemblPlants:TraesCS1D01G072800.1 | TIGR:cd06257 |
| TIGR:cd10747 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:53257538..53262862
Molecular Weight (calculated)
36799.8 Da
IEP (calculated)
9.204
GRAVY (calculated)
-0.396
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEADYYKVLG VGRGATDDEL KKAYRRLVMK YHPDKNPSPQ ADTLFKQVSV AYDVLSDPDK RAIYDQYGEE GIKAGVATPS PSAAHAHAHA HGFGGGSGPG
101: FRFHPRSADE IFQEMFGGSF FGQGPRGPWS GGSAPQSVPG CAASVAAAAA GFSPGSGEAS GGSARKGAAI ERQLACSLED LHKGATKKMK ISRDVLDSVG
201: KPMSVEEILT IDIKPGWKKG TKITFPEKGN ETRNVIPSDL VFIIEERAHP KFKRDGNDLV YTHKISLVDA LTGCAVQLTT LDGRSLTVPV KSVISPTYEE
301: VVQGEGMPIT REPSKKGNLR IKFQIKFPTA LTADQKAGVQ QLLS
101: FRFHPRSADE IFQEMFGGSF FGQGPRGPWS GGSAPQSVPG CAASVAAAAA GFSPGSGEAS GGSARKGAAI ERQLACSLED LHKGATKKMK ISRDVLDSVG
201: KPMSVEEILT IDIKPGWKKG TKITFPEKGN ETRNVIPSDL VFIIEERAHP KFKRDGNDLV YTHKISLVDA LTGCAVQLTT LDGRSLTVPV KSVISPTYEE
301: VVQGEGMPIT REPSKKGNLR IKFQIKFPTA LTADQKAGVQ QLLS
001: MGVDYYNVLK VNRNANEDDL KKSYRRMAMK WHPDKNPTSK KEAEAKFKQI SEAYDVLSDP QRRQIYDQYG EEGLKSTDLP TAAETAAHQQ QRSYSSSNSE
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
101: FRYYPRDAED IFAEFFGESG DAFGGGSSGR TRGDGGDGGG RRFKSAEAGS QANRKTPPTN KKTTPPANRK APAIESKLAC TLEELYKGAK KKMRISRVVP
201: DDFGKPKTVQ EILKIDIKPG WKKGTKITFP EKGNQEPGVT PADLIFVVDE KPHSVFKRDG NDLILEKKVS LIDALTGLTI SVTTLDGRSL TIPVLDIVKP
301: GQEIVIPNEG MPTKDPLKRG DLRVTFEILF PSRLTSEQKN DLKRVLGGS
Arabidopsis Description
DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:Q9SY77]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.