Factsheet for Bra040063.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 2
golgi 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58657	Canola	cytosol	96.32	96.32
CDY22173	Canola	cytosol	96.32	93.45
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	93.56	91.32
AT3G08910.1	Thale cress	nucleus	88.34	89.16
Bra029729.1-P	Field mustard	nucleus	89.57	89.02
KRG88624	Soybean	nucleus	80.37	77.74
KRH65726	Soybean	nucleus	80.06	77.45
VIT_08s0105g00350.t01	Wine grape	cytosol	78.83	76.04
Solyc09g005350.2.1	Tomato	nucleus, plastid	79.14	75.88
PGSC0003DMT400059397	Potato	cytosol	79.14	75.88
KRH75968	Soybean	nucleus	77.91	75.37
Bra024199.1-P	Field mustard	cytoskeleton, cytosol, nucleus	66.87	67.91
Bra011031.1-P	Field mustard	cytosol	69.63	64.49
Bra031127.1-P	Field mustard	cytosol	65.95	63.61
EES17644	Sorghum	cytosol	59.82	62.3
Zm00001d010958_P001	Maize	cytosol	61.96	61.96
TraesCS1A01G070300.1	Wheat	cytosol	60.74	58.41
TraesCS1D01G072800.1	Wheat	nucleus	60.43	57.27
TraesCS1B01G088700.1	Wheat	cytosol	60.74	57.06
Bra009848.1-P	Field mustard	cytosol	54.29	56.01
Bra018099.1-P	Field mustard	cytosol	56.44	55.09
Bra033783.1-P	Field mustard	cytosol	54.6	54.77
Bra020505.1-P	Field mustard	cytosol	55.21	54.05
Bra019519.1-P	Field mustard	cytosol	54.91	53.92
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	55.83	53.53
Bra018443.1-P	Field mustard	nucleus	55.83	52.15
HORVU1Hr1G015040.2	Barley	plastid	60.12	51.17
GSMUA_Achr6P15600_001	Banana	cytosol	65.95	48.64
Bra010365.1-P	Field mustard	mitochondrion	52.15	43.81
HORVU1Hr1G015060.2	Barley	plastid	31.9	36.49
Bra007687.1-P	Field mustard	golgi	35.28	33.24
Bra003501.1-P	Field mustard	nucleus	34.36	30.19
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	31.9	28.73
Bra036942.1-P	Field mustard	nucleus	30.37	28.37
Bra002385.1-P	Field mustard	nucleus	34.05	26.3
Bra002386.1-P	Field mustard	nucleus	33.74	26.07
Bra020169.1-P	Field mustard	nucleus	33.74	26.0
Bra006608.1-P	Field mustard	nucleus	32.52	25.98
Bra018413.1-P	Field mustard	nucleus	30.67	24.88
Bra019886.1-P	Field mustard	nucleus	31.6	23.79
Bra020721.1-P	Field mustard	mitochondrion	27.3	19.91
Bra030245.1-P	Field mustard	plastid	27.3	19.69
Bra037514.1-P	Field mustard	mitochondrion	26.99	19.47
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	24.85	17.69
Bra035201.1-P	Field mustard	plastid	26.99	17.56
Bra010892.1-P	Field mustard	mitochondrion	23.01	17.44
Bra014400.1-P	Field mustard	golgi	35.58	17.37
Bra011820.1-P	Field mustard	cytosol	27.61	17.01

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra040063	EnsemblPlants:Bra040063.1	EnsemblPlants:Bra040063.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006457
GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	UniProt:M4FG38	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625	PFscan:PS50076
PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565	SUPFAM:SSF49493	UniParc:UPI0002544576
SEG:seg	:	:	:	:	:

Description

AT3G08910 (E=2e-150) | DNAJ heat shock protein, putative

Coordinates

chrA01:+:27719499..27721477

Molecular Weight (calculated)

36380.2 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.683

Length

326 amino acids

Sequence
(BLAST)

001: MGVDYYKVLQ VDRSAKDEDL KKAYRKLAMK WHPDKNPNNK IEAEAKFKQI SEAYDVLSDP QKRAIDDQDG EEGQNSQAPP PGPGGFPGGS DRGASFRFNG
101: RSADDIFSEF FGFSRPPGDG FRFAEDVFSS YRSAAPETFN VAPPRKAAPI ERQLPCSLED LYKGITKKMK ISRDVLDSSW RPTTVEEILT IEIKPGWKKG
201: TKITFPEKGN EQRGIIPSDL VFIVDEKPHA VFKRDGNDPV ITQKIPLVEA LTGYTAQVTT LDGRTLTVPV NNVISPSYEE VVKGEGMPIP KDPSKKGNLR
301: IKFNVKFPSR LTTEQKSGIK RMFSSC

Best Arabidopsis Sequence Match ( AT3G08910.1 )
(BLAST)

001: MGVDYYKVLQ VDRNAKDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAIYDQYG EEGLTSQAPP PGAGGGFSDG GASFRFNGRS
101: ADDIFSEFFG FTRPFGDSRG AGPSNGFRFA EDVFSSNVVP PRKAAPIERQ LPCSLEDLYK GVSKKMKISR DVLDSSGRPT TVEEILTIEI KPGWKKGTKI
201: TFPEKGNEQR GIIPSDLVFI VDEKPHAVFK RDGNDLVMTQ KIPLVEALTG YTAQVSTLDG RSVTVPINNV ISPSYEEVVK GEGMPIPKDP SKKGNLRIKF
301: TVKFPSRLTT EQKSGIKRMF SSS

Arabidopsis Description

At3g08910 [Source:UniProtKB/TrEMBL;Acc:Q9SR91]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.