Factsheet for Bra024199.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
golgi 1
nucleus 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29908	Canola	cytoskeleton, cytosol, nucleus	99.69	99.69
CDX92876	Canola	cytoskeleton, cytosol, nucleus	97.2	98.11
Bra011031.1-P	Field mustard	cytosol	90.65	82.67
Bra031127.1-P	Field mustard	cytosol	84.11	79.88
KRH25647	Soybean	nucleus	79.75	73.35
KRH55895	Soybean	endoplasmic reticulum, nucleus	79.44	72.44
KRH10937	Soybean	cytosol	74.77	70.8
Solyc02g077670.2.1	Tomato	cytosol	74.14	69.39
PGSC0003DMT400081223	Potato	cytosol	73.21	68.92
Bra029729.1-P	Field mustard	nucleus	69.47	67.99
KRH12423	Soybean	cytoskeleton, cytosol, nucleus	55.45	67.68
Bra001337.1-P	Field mustard	cytoskeleton, cytosol, nucleus	70.09	67.37
KRH21363	Soybean	cytosol	64.49	67.21
Bra040063.1-P	Field mustard	cytoskeleton, cytosol, nucleus	67.91	66.87
KRH10940	Soybean	cytosol	63.24	60.42
Bra010365.1-P	Field mustard	mitochondrion	71.96	59.54
KRH21362	Soybean	cytosol	62.93	59.41
Bra009848.1-P	Field mustard	cytosol	57.32	58.23
Bra020505.1-P	Field mustard	cytosol	59.81	57.66
Bra027838.1-P	Field mustard	cytoskeleton, cytosol, nucleus	60.44	57.06
Bra033783.1-P	Field mustard	cytosol	56.7	56.0
Bra018099.1-P	Field mustard	cytosol	58.26	55.99
Bra018443.1-P	Field mustard	nucleus	60.75	55.87
Bra019519.1-P	Field mustard	cytosol	56.39	54.52
KRH40259	Soybean	cytosol	26.79	54.09
Bra007687.1-P	Field mustard	golgi	34.89	32.37
Bra003501.1-P	Field mustard	nucleus	33.64	29.11
Bra002385.1-P	Field mustard	nucleus	37.69	28.67
Bra002386.1-P	Field mustard	nucleus	37.38	28.44
Bra006608.1-P	Field mustard	nucleus	36.14	28.43
Bra032204.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	31.78	28.18
Bra036942.1-P	Field mustard	nucleus	30.53	28.08
Bra020169.1-P	Field mustard	nucleus	36.76	27.9
Bra018413.1-P	Field mustard	nucleus	28.97	23.13
Bra019886.1-P	Field mustard	nucleus	30.53	22.63
Bra030245.1-P	Field mustard	plastid	30.53	21.68
Bra022249.1-P	Field mustard	cytosol, mitochondrion, plastid	28.04	19.65
Bra035201.1-P	Field mustard	plastid	30.53	19.56
Bra037514.1-P	Field mustard	mitochondrion	27.41	19.47
Bra020721.1-P	Field mustard	mitochondrion	27.1	19.46
Bra011820.1-P	Field mustard	cytosol	29.91	18.15
Bra014400.1-P	Field mustard	golgi	34.89	16.77
Bra010892.1-P	Field mustard	mitochondrion	22.43	16.74

Protein Annotations

Gene3D:1.10.287.110	MapMan:19.1.5.2	Gene3D:2.60.260.20	EnsemblPlantsGene:Bra024199	EnsemblPlants:Bra024199.1	EnsemblPlants:Bra024199.1-P
InterPro:DnaJ_C	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0006457	GO:GO:0008150	GO:GO:0009987	GO:GO:0051082	InterPro:HSP40/DnaJ_pept-bd	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4E5Z5	PFAM:PF00226	PFAM:PF01556	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR24078	PANTHER:PTHR24078:SF298	SMART:SM00271	SUPFAM:SSF46565
SUPFAM:SSF49493	UniParc:UPI0002540C2F	SEG:seg	:	:	:

Description

AT3G08910 (E=1e-126) | DNAJ heat shock protein, putative

Coordinates

chrA03:+:26931382..26932655

Molecular Weight (calculated)

35480.2 Da

IEP (calculated)

9.564

GRAVY (calculated)

-0.650

Length

321 amino acids

Sequence
(BLAST)

001: MGVDYYKLLQ VDRSATDDDL KKAYRKLAMK WHPDKNPTNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAASGASYF STGFNPRSAD
101: DIFAEFFGFS TPFGGGGGGG AGGSMHHHHH HHPHHHHQAA ARKVAPIENK LPCSLEDLYK GTTKKMKISR EILDASGKAT QTEEILTIGV KPGWKKGTKI
201: TFPEKGNEHP GVIPADLVFI IDEKPHPVFT RDGNDLIVTQ KISLAEALTG YTVNLTTLDG RTLTIPVTNV IHPEYEEVVP KEGMPLQKDQ TKKGNLRIKF
301: NIKFPARLTS EQKSGFKKLL G

Best Arabidopsis Sequence Match ( AT4G28480.1 )
(BLAST)

001: MGVDYYKVLQ VDRSANDDDL KKAYRKLAMK WHPDKNPNNK KDAEAKFKQI SEAYDVLSDP QKRAVYDQYG EEGLKGNVPP PNAATSGASY FSTGDGSSSF
101: RFNPRSADDI FAEFFGFSTP FGGGGGGTGG QRFASRMFGD DMYASFGEGA GGGGAMHHHH HHHHHAAARK VAPIENKLPC SLEDLYKGTT KKMKISREIV
201: DVSGKAMQVE EILTIGVKPG WKKGTKITFP EKGNEHPGVI PADLVFIIDE KPHPVFTREG NDLIVTQKVS LADALTGYTA NIATLDGRTL TIPITNVIHP
301: EYEEVVPKEG MPLQKDQTKK GNLRIKFNIK FPARLTAEQK AGFKKLIG

Arabidopsis Description

DNAJ heat shock family protein [Source:UniProtKB/TrEMBL;Acc:O49457]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.